Komagataella phaffii: PAS_chr2-2_0013
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Entry
PAS_chr2-2_0013 CDS
T01092
Name
(RefSeq) Subunit of a replication-pausing checkpoint complex (Tof1p-Mrc1p-Csm3p)
KO
K10997
replication fork protection complex subunit TIMELESS/Tof1/Swi1
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr2-2_0013
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr2-2_0013
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Fork protection complex
PAS_chr2-2_0013
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
Check point factors
FPC (fork protection complex)
PAS_chr2-2_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIMELESS
DUF5740
Motif
Other DBs
NCBI-GeneID:
8198972
NCBI-ProteinID:
XP_002492204
UniProt:
C4R350
LinkDB
All DBs
Position
2:complement(2369396..2372953)
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AA seq
1185 aa
AA seq
DB search
MSLYAEDPELDDFIIDNEPSGTHHIVESSSDEEERFTEKSSGPIKQARSTQPELQNHDEE
LRKRVIRSHIAILCSSLGGIDHSTESKLSIYKLGGEALVCLKDIKRWIRTVDHEMNNWDV
ASACADCNLVPNDLIHIMTQWELDNQGKKVENPKYWESIVVSSLELLVMLTNPLVLEFEK
TDEKKIVLYPKLKKAHLTYKNRILNFQGGLTLKAVLRILLPLLVSNKRSTRDLKVMYLCL
TFIRNVIRIEPADARINSKKTTKQLNISSNYPVGVSPDDVDVNRVMIILKKTKVLSLILT
LTSNADKAYNDTMLHQLCLECLYYLLNGIKVSSFILGEPQNEHDSSMTEAGLELSDLVSK
EKNIFDGIKRNHSSRHSNFGTLLSLQRGNERITISGSPKDLLATLDKTKSHSNSRTYTRI
AKNESTNRDLDSQLRLHKAKRLDSEGLKILIEFLQSFMEESFDPFFSKLIHTYSSDDNIR
SYLMYAYFYVLQWILEYFQGLKKKDFYNIASAFDHSNVILILRKVSEYHDLKEFNMCYVL
IGCLDELLSNACFMLSTNDSQLIDRAEGLLNSIVGQEAYLELFISIVSSAHKVSTQFVDK
AAQFLSTIFKSTEAMVRFYDSDQVIIQKSKSTKKRNSRIAATEEEDNEPGEVDDIQMRTL
AFKKKADIKSIRTKLIRNETVYLFISIWERLDDVDAAHFKLALHFFYDVFVKYELVLHLY
RLDFLKTLYWVNANHLVLPIGKSTRRDLQSFSKYFMSKLYQLMNHSKEILVEMPFCSLNP
DVSIRQYFLTGEKPDVHEKTAREYKVGKLEFTEELNLEQKIGILVSLLKALNLDLVEWLK
HNVETIVDSMSSWNDRDIVTGEDLTSKDEDLYILQASNKAYNSAIRRNPTFRKLLELVGY
DIPTHTGMKCVLQKHIDQSSLEICLSFIKKYLEEDYVPSNHAEVEELVNLKKPAPNSRNG
TDEFNGADNQHNDQEDDLFVNESDDDNQIEFEIGENGQRRIVNDNLDIIEQQLKFNERRN
RGVARPPSKRAKRNRVISSEDEDISDGLSSLNKKVKRSKRKQARRIRKTIFDSNNEIGEE
SSGEGAKRKPSNLDLNIKSSEYIDDSDLELTDEEVFFFREDTLRSMLNESNGQLTAAQLQ
ELSNITINHLKSRSLTGGDLENLTIKNSIAKEGTPISFAQPIDDE
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttatgcggaagatccagaactggatgatttcattattgacaatgagcccagt
ggcactcatcatatagttgaaagcagtagtgatgaagaagaacgtttcacagaaaaatct
tcaggccccataaagcaagctagatccacccaacctgagttgcagaatcacgacgaagag
ttaagaaagagggttattagatcgcatatagctattctatgcagctcattgggcggaata
gatcacagtacagaatcgaaattgtccatttataaattgggcggagaggcattagtttgc
ttaaaggatatcaaacgatggatcagaacagtcgaccacgaaatgaacaattgggacgtt
gcatctgcttgtgccgattgcaatttagtgcctaatgatttgatacatataatgacccaa
tgggaactagataatcaaggtaaaaaagtagaaaaccccaagtattgggaatcaattgtg
gtgtcaagtttagaactgctagtgatgctaacaaacccgctggtacttgaatttgagaaa
acagacgagaaaaagattgttctttaccccaagctaaagaaagctcatctcacgtataag
aatagaatattgaactttcagggcggccttactttgaaagccgtattgaggattttgcta
cccttgctagttagtaacaagagatcgacaagggacctaaaagttatgtatctatgtttg
acctttatcagaaacgttataagaatagaaccggcagatgcaaggatcaactctaagaag
actaccaaacaactgaatatcagtagtaactatcctgtgggcgtatctcccgacgacgtg
gatgtgaaccgggtgatgattattctgaagaaaaccaaagtcttgagcttaatattgact
ctaaccagcaatgcagacaaagcttacaatgatacaatgctccaccagctgtgtctagaa
tgtttgtactatcttctcaacggtataaaagtgtcgagtttcatattgggggaacctcaa
aatgagcatgactcgagtatgacggaagctgggcttgaattgagtgatttggtgagtaaa
gaaaagaatatctttgatggtattaagagaaatcacagctccagacactctaactttggc
actcttctatccctgcaaagaggaaacgagagaatcaccatctctggatctccaaaagac
ttattggcaaccctagataagacaaaatctcatagcaatagtcgcacgtatacccggatc
gccaagaatgagtcgacgaatagagatttagactcacagttaagattgcacaaagctaaa
cgactagactcagaagggttgaagattctcattgagtttttacagtcgtttatggaagaa
tcttttgatccttttttttcgaaactgattcacacttactcttcagatgataacatccga
tcatatttgatgtatgcttatttctatgtccttcaatggatattggagtattttcagggc
ttgaaaaaaaaagatttctacaatatagcttctgcatttgaccactccaatgtgattttg
attttaagaaaagtttccgagtaccatgacctaaaggagtttaatatgtgttatgttctg
attggatgtcttgacgagttgttgtccaatgcctgcttcatgttgtccacgaacgattcg
caactgattgaccgagcagaaggtttactgaattcaatagttgggcaagaggcttattta
gagttatttatatcgattgtttcatctgctcataaggtatctactcaatttgttgacaaa
gcggcccaatttttgtctacgatctttaaaagtacggaggcaatggtaagattctacgat
tccgaccaagttattattcagaaatctaaatctacgaaaaagagaaactcaaggattgca
gcaactgaggaagaagataatgagccaggtgaagttgatgatattcaaatgcggacatta
gcatttaaaaagaaagctgacattaaatcgatcagaaccaaactcattcggaatgaaact
gtttacttgttcatcagcatctgggaaaggctggatgatgtggatgcagcccacttcaaa
ctggcactccatttcttttatgatgtttttgtcaaatatgagttagtacttcatctctac
agattggactttttgaaaactctttattgggtcaacgcaaatcacttagtccttccaatc
ggaaagtcaactcgaagagatttgcaatcattctccaagtacttcatgtccaaattgtat
cagttaatgaatcattcaaaggaaattttggtggaaatgccattttgttctttgaatcct
gacgtatcaatcaggcaatactttctcactggagaaaagcccgacgtccatgagaaaact
gctagagagtacaaagtagggaagctggagtttactgaagagctaaacttggaacaaaaa
attggaatcttggtttctctgttaaaagcgttaaacttggacttggttgaatggctcaag
cataatgttgagacgatcgttgattccatgagctcatggaatgacagagatattgtgaca
ggtgaagatttaacttcaaaagatgaggacctatatattcttcaagcttccaacaaagcg
tacaattcagctattcgaagaaaccctacatttcgaaaacttctggagttggtcggatat
gacataccgacacatacaggaatgaaatgtgttctccagaaacacattgaccaaagttct
ttagagatatgcctttctttcatcaaaaagtatcttgaagaggactatgttcctagtaat
catgctgaggtagaggaactggtaaacttgaagaaaccagctcccaactccagaaatggt
actgatgaattcaacggtgctgacaatcagcataatgatcaagaagatgatcttttcgtc
aatgaatctgacgatgacaatcaaatagaatttgagattggagagaatggacaacgtcgc
attgtgaatgacaacctagatatcatcgagcaacagttgaaattcaatgaacgaagaaat
cgaggtgttgccaggcctccatctaagagagctaagcggaacagggtcatcagttcagaa
gatgaggatatctccgatggcctttcatcactaaataagaaggttaaaagatctaagaga
aaacaagcaagaagaataagaaaaacaatttttgacagcaacaatgaaataggagaagaa
tcaagcggggaaggtgctaaaaggaaaccttccaatctagatctcaacataaagtcttca
gaatatatcgatgacagcgatttagagttgaccgatgaagaagtattcttttttagagaa
gatactttgagatcaatgctgaatgaaagcaatggccaattaaccgcagctcaattgcaa
gagctctccaacattacaataaatcatttaaagtctcggtcgttgaccggaggggaccta
gaaaaccttacgatcaagaattcaatagccaaggaggggacccctatttcatttgcccaa
ccaatcgatgatgaataa
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