Pseudomonas putida BIRD-1: PPUBIRD1_1661
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Entry
PPUBIRD1_1661 CDS
T01975
Symbol
sdhA
Name
(GenBank) SdhA
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00020
Citrate cycle (TCA cycle)
ppb00190
Oxidative phosphorylation
ppb00650
Butanoate metabolism
ppb01100
Metabolic pathways
ppb01110
Biosynthesis of secondary metabolites
ppb01120
Microbial metabolism in diverse environments
ppb01200
Carbon metabolism
Module
ppb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppb_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPUBIRD1_1661 (sdhA)
00650 Butanoate metabolism
PPUBIRD1_1661 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PPUBIRD1_1661 (sdhA)
Enzymes [BR:
ppb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PPUBIRD1_1661 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
HI0933_like
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ADR59329
LinkDB
All DBs
Position
1881305..1883077
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AA seq
590 aa
AA seq
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MASIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITMDADGQDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALSEGVEYRDASDTDVDVALNRLNKLNERTSGEDVASLKRELQSCMQNYFGVFRTGE
YMQKGIEQLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRG
AHAREDFEDRDDENWLCHTLYYPGEKRVAKRGVNFAPKTVPAFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctagcattccaaccatttccttcgacgccatcatcatcggtggcggcggcgccggc
atgcgcgcagcgctgcaactggctcaaggcggccacaagactgccgtagtcaccaaggtc
ttcccgacccgttcgcacaccgtatccgcccagggcggcattacctgcgccatcgcttcg
gccgacccgaacgacgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggctgcggtcttcgaa
ctggaccacatgggtctgccgttctcgcgcaccgaaaccggtcgcatctaccagcgcccg
ttcggtggtcagtccaaggacttcggtaaaggtggccaggccgcccgtacctgtgccgct
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaagcgggt
accacattcctcaacgagtactatgcagttgacctggtgaaaaaccaggacggcgcattc
gtgggtgtgatcgccatctgcatcgaaactggcgaaaccctgtacatcaagtccaaggca
accgtgctggccactggcggtgcgggccgtatctatgcgtccaccaccaacgccctgatc
aacaccggtgacggtatcggcatggccctgcgtgcaggcgtgccggtgcaggacatcgaa
atgtggcagttccacccgaccggtatcgccggcgccggtgtactggtcaccgagggttgc
cgcggtgaaggtggctacctgatcaacgcccacggcgagcgcttcatggagcgttacgcg
ccgaacgccaaagacctggccggccgcgacgtggttgcccgttccatggtcaaggaaatc
atcgccggcaacggcgtgggcccgaacaaggaccacgtactgctgaagctggaccacctg
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgagctgtccaagaccttcgcc
cacgttgaccctgtggtcgcaccggtgccggtcgtgccgacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggccatcaccatggacgccgacggccaggatcac
atcatcccgggcctgttcgccgtaggtgaagtggcgtgcgtatcggttcacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtgttcggccgtgctgccggcctgcac
ctggagaaggcgctgagcgaaggcgtggaataccgcgacgccagcgacaccgacgtcgat
gttgccctgaaccgcctgaacaagctcaacgagcgtaccagcggtgaagacgttgccagc
ctgaagcgtgagctgcagagctgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgcagaagggtatcgagcaattggccggtctgcgtgaccgtatcgccaacgtcaag
atcaacgacaagtcccaggccttcaacaccgcgcgtatcgaagcgctggagctgcagaac
ctgctggaagttgccgaagctaccgccatcgcggcggaagcccgtaaagagtcccgcggc
gctcacgcccgtgaagacttcgaagaccgtgacgacgaaaactggctgtgccacaccctg
tactacccgggtgagaagcgcgttgccaagcgcggcgtcaactttgcgccgaagactgtt
ccagccttcgaaccaaaagtccggacttactaa
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