KEGG   Pseudomonas putida BIRD-1: PPUBIRD1_4730
Entry
PPUBIRD1_4730     CDS       T01975                                 
Symbol
putA
Name
(GenBank) PutA
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
ppb  Pseudomonas putida BIRD-1
Pathway
ppb00250  Alanine, aspartate and glutamate metabolism
ppb00330  Arginine and proline metabolism
ppb01100  Metabolic pathways
ppb01110  Biosynthesis of secondary metabolites
Module
ppb_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:ppb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    PPUBIRD1_4730 (putA)
   00330 Arginine and proline metabolism
    PPUBIRD1_4730 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppb03000]
    PPUBIRD1_4730 (putA)
Enzymes [BR:ppb01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     PPUBIRD1_4730 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     PPUBIRD1_4730 (putA)
Transcription factors [BR:ppb03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    PPUBIRD1_4730 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH RHH_1
Other DBs
NCBI-ProteinID: ADR62288
LinkDB
Position
5279771..5283724
AA seq 1317 aa
MATTTLGVKLDDPTRERLKAAAQSIDRTPHWLIKQAIFNYLEKLEGGATLTELNGHVSNL
ADDAGEVQADHSHQCFLEFAESILPQSVLRSAITAAYRRPEQEVVPMLLEQARLSAPLAD
ATNKLAAGIAEKLRNQKSAGGRAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDKGTRD
ALIRDKISTGNWQPHLGNSPSLFVNAATWGLLLTGKLVSTHNETGLTSSLTRIIGKSGEP
MIRKGVDMAMRLMGEQFVTGETIAEALANASRFEAKGFRYSYDMLGEAALTEHDAQKYLA
SYEQAIHSIGKASHGRGIYEGPGISIKLSALHPRYSRAQYERVMEELYPRLLSLTLLAKQ
YDIGLNIDAEEADRLELSLDLLERLCFEPSLAGWNGIGFVIQAYQKRCPYVIDYVIDLAK
RSRHRLMIRLVKGAYWDSEIKRAQVEGLEGYPVYTRKVYTDVSYVACARKLLAVPEAIYP
QFATHNAHTLSAIYHIAGQNYYPGQYEFQCLHGMGEPLYEQVVGKIADGKLNRPCRVYAP
VGTHETLLAYLVRRLLENGANTSFVNRIADHSISIQELVADPVASIERMGTQEGSIGLPH
PRIPLPRDLYGTERANSAGIDMANEHRLASLSCAMLATAHNDWKAAPLLACAASESAAAP
VLNPADHRDVVGHVQEATVADVDNAIQCALNAAPIWQATPPAERAAILERTADLMEAEIQ
PLMGLLIREAGKTFANAIAEVREAVDFLRYYAVQARNDFSNDAHRPLGPVVCISPWNFPL
AIFTGQVAAALAAGNPVLAKPAEQTPLIAAQAVRLLLEAGIPEGVLQLLPGRGETVGAGL
VGDERVKGVMFTGSTEVARLLQRNVAGRLDNQGRPIPLIAETGGQNAMIVDSSALTEQVV
IDVVSSAFDSAGQRCSALRVLCLQEDSADRVIEMLKGAMAESRLGCPDRLAVDIGPVIDA
EAKAGIEKHIQGMREKGRPVYQVAIADAAEIKRGTFVMPTLIELDSFDELKREIFGPVLH
VVRYNRRNLDQLIEQINNSGYGLTLGVHTRIDETIAKVVETANAGNMYVNRNIVGAVVGV
QPFGGEGLSGTGPKAGGPLYLYRLLSTRPADAIGRHFQQQDGEGKPDRTLHEQLVKPLHG
LKAWAENNQLADLAALCSQFASQSQSGIARLLPGPTGERNSYTILPREHVLCLADNETDL
LAQFAAVLAVGSSAVWVDGEPGKALRARLPRELQAKVKLVADWNKDEVAFDAVIHHGDSD
QLRGVCQQVAKRAGAIVGVHGLSSGDHQIALERLVIERAVSVNTAAAGGNASLMTIG
NT seq 3954 nt   +upstreamnt  +downstreamnt
atggcgactaccacccttggggtcaaactcgacgacccgacccgtgagcgactcaaagca
gctgcgcagtccattgaccgcacgccgcactggttgatcaagcaagcgatcttcaactac
ctggagaagctcgagggtggcgccaccctgaccgaactcaacggtcatgtcagcaacctg
gccgacgatgccggtgaagtccaggctgaccacagccaccagtgcttcctcgaatttgcc
gaaagcatcttgccgcagtcggtactgcgctcggcgatcaccgctgcctaccgccgcccc
gagcaggaagtggtgccaatgctgctggagcaggcgcgcctgagcgcgccgctggccgac
gccaccaacaagctggccgcaggcattgccgaaaaactgcgcaaccagaaaagcgccggc
ggccgtgccggtattgtccagggcctgctgcaggagttctcgctgtcatcccaggaaggc
gtggcgctgatgtgccttgccgaagccctgctgcgtatccccgacaaaggtacccgtgat
gccctgatccgcgacaagatcagtaccggcaactggcagccgcacctgggcaacagcccg
tcactgttcgtcaacgccgccacctgggggctgctgctgaccggcaagctggtcagcacc
cataacgaaaccggcctcacctcctcgctcacccgcatcatcggcaagagcggcgaaccg
atgatccgcaagggcgtcgacatggccatgcgcctgatgggtgagcagttcgtcaccggc
gagaccattgccgaagccctggccaacgccagccgtttcgaggccaaaggcttccgttac
tcctacgacatgctcggcgaagccgcactgaccgaacacgacgcgcagaagtacctggcg
tcctacgagcaggccatccactcgatcggcaaggcctcgcatggccgtggtatctatgaa
ggcccaggcatctcgatcaagctgtcggcactgcacccgcgctacagccgggcccagtac
gagcgcgtgatggaagagctgtacccgcgcctgctgtcgctgaccctgctggccaagcag
tacgacatcggccttaacatcgacgccgaagaagccgaccgcctggagctttcgctggac
ctgctcgaacgcctgtgcttcgagccatccctggctggctggaacggcatcggcttcgtt
atccaggcctaccagaagcgctgcccgtacgtgatcgactacgtcatcgatctggccaag
cgcagccgccaccgcctgatgatccgcctggtaaaaggcgcctactgggacagcgagatc
aagcgtgcccaggtcgaaggcctggaaggctacccggtctatacccgcaaggtgtacacc
gacgtgtcctacgtcgcatgcgcccgcaagctgctggccgtaccagaagccatctacccg
cagttcgccacccacaacgcccacaccctgtcggccatctaccacattgccgggcagaac
tattacccgggccagtacgagttccagtgcctgcacggcatgggcgagccgctgtacgag
caagtggtcggcaagattgccgatggcaagctgaaccgcccgtgccgcgtgtatgcaccg
gtcggcacacatgaaacgctgctggcctacctggtgcgccgcctgctggaaaacggcgcc
aacacctcgttcgtcaaccgcatcgccgaccactcgatttccatccaggaactggtcgcc
gacccggtggccagcatcgagcgcatgggtacccaggaaggcagtatcggcctgccgcac
ccacgcatcccgctgccgcgcgatctgtatggcactgaacgagccaactcggccggcatc
gacatggccaacgaacaccgcctggcatcgctgtcctgcgccatgctggccaccgctcac
aatgactggaaggctgccccgctgctggcctgcgccgccagcgagagcgctgccgcaccg
gtgctgaacccggcagaccaccgcgacgtagtcggccatgtgcaggaggccaccgttgcc
gacgtggacaacgccatccagtgcgcactgaacgccgcgccgatctggcaggccaccccg
ccagccgagcgtgctgccattctggagcgcaccgccgacctgatggaggccgagatccag
ccgctgatgggcctgctcattcgcgaggccggcaagaccttcgccaacgccatcgccgaa
gtgcgtgaagccgtggacttcctgcgctactacgcggtgcaggcacgtaacgacttcagc
aacgacgcccaccgcccactgggcccggtggtgtgcatcagcccgtggaacttcccgctg
gcgatcttcaccggccaggtggccgcagccctggctgccggcaacccggtactggccaag
cctgccgagcaaaccccgctgatcgccgcccaggccgtgcgcctgctgctggaagcgggc
atcccagaaggcgtgctgcagttgctgccgggccgaggtgaaaccgtcggcgccggcctg
gtcggagacgagcgcgtcaaaggcgtgatgttcaccggctccacagaagtggcccgcctg
ctgcagcgcaacgtcgctggccgcctggacaaccagggccggccgatcccgctgatcgcc
gaaacaggcggccagaacgcgatgatcgtcgactcctcggcactgaccgaacaggtcgtg
atcgacgtggtgtcctcggccttcgacagtgccggccagcgttgctcggccctgcgcgtg
ctgtgcctgcaggaagactccgccgaccgcgtgatcgaaatgctcaagggcgccatggct
gaaagccgcctgggctgcccggaccgcctggccgtggacatcggcccggtgatcgatgcc
gaagccaaggccggcatcgagaagcacatccagggcatgcgcgagaaaggccgcccggtc
taccaggtcgcgattgccgatgctgccgagatcaagcgcggcaccttcgtcatgccaacc
ctgatcgagctggacagcttcgacgagctgaagcgcgaaatcttcggccccgtgctgcac
gtggtgcgctacaaccgccgcaatctggaccagctgatcgagcagatcaacaactccggc
tacggcctgaccctcggcgtgcacacccgtatcgacgagaccatcgccaaggtggtggaa
accgccaacgccggcaacatgtacgtcaaccgcaacattgtaggtgcagtggtgggcgtg
cagccgttcggtggtgaaggcctgtctggcaccggcccgaaagccggcggcccgctgtac
ctctaccgcttgctgtcgacccgcccggccgacgccattggccgccacttccagcagcag
gacggcgaaggcaagccagaccgcactctgcacgaacagctggtcaaaccgctgcacggc
ctgaaggcctgggccgagaacaaccagcttgccgacctggccgcgctgtgcagccagttc
gccagccagtcgcagagcggcatcgctcgcctgctgccaggcccgaccggcgagcgcaac
agctacaccattctgccgcgggagcacgtactgtgcctggccgacaacgaaaccgacctg
ctggcgcagttcgccgcggtactggccgttggcagctcggcggtgtgggttgacggtgaa
ccgggcaaggctctgcgcgcccgcctgccgcgtgagctgcaggccaaggtgaagctggtc
gcggactggaacaaggatgaagtggcgttcgacgcagtaatccaccatggcgactcggac
cagctgcgcggcgtatgccagcaggtggccaagcgtgccggggcgatcgttggggtgcac
gggctgtccagcggtgatcaccagattgcgctggagcgcctggtcatcgagcgcgcggtg
agcgtgaacactgcagcggcgggtggtaacgccagcctgatgaccatcggctaa

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