Pediococcus pentosaceus SL4: T256_03995
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Entry
T256_03995 CDS
T02906
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ppen
Pediococcus pentosaceus SL4
Pathway
ppen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
T256_03995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_03995
Enzymes [BR:
ppen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
T256_03995
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
T256_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Pox_A31
Motif
Other DBs
NCBI-ProteinID:
AHA04945
LinkDB
All DBs
Position
796708..798051
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AA seq
447 aa
AA seq
DB search
MQEDKYLTVSALTNYIKRKFDADPYLHRVYLVGEISNFRLRTNSHQYFSLKDENAKISAI
MFKSAFAKVKFQPEEGMRVIVSGRISLYPGNGSYQIYVDSMQPDGVGALYQAYEQLKIKL
SQEGLFEAPKLPIPKYPRKIAIVTSPSGAVIRDIITTVSRRYPIVQLVLFPALVQGNEAA
NSIAAQIKMINTLDDFDTIIIGRGGGSIEDLWPFNEEVVARAIFASKLPVISSVGHETDT
TIADLVADMRAATPTAAAELATPVLTDILEELQKLQLQTIVAFRNILKMRSQQVQHLQQS
YIFQEPQRLYEGYVQNVDILTEKLISLEKQQITTAEGSFKTLNSRLLANTPASRIKMAKQ
NVEHLRQMTNNNITNRFSKYANDLNSLIGSLDTLSPLKIMSRGYTYVTRDTKVVKSIEDL
SIDDKIQLNFSDGSANAVIKTINSEDK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagataagtatttaacggtcagtgcactaaccaattatattaaacgaaaattt
gatgctgatccgtatttacatcgcgtttatttagtgggggaaatttcaaactttcgctta
agaactaacagtcaccaatattttagtttgaaggacgaaaacgcgaagattagtgcgatc
atgtttaaatctgcatttgcgaaggttaagtttcaacctgaagaaggcatgcgagtgatt
gtgagtgggcgaattagtttatacccaggaaatggtagttaccaaatttatgtggatagt
atgcaaccggatggtgtaggagctttatatcaagcatatgaacagttaaagataaaatta
tcccaagaaggtttatttgaagcccctaagctaccaattcctaagtatccccgtaagatt
gcgattgtgactagcccttctggggccgtgattagagatattatcacgacggtgagccgt
cgttatccgattgttcaactggttttatttccagctttagttcaaggtaatgaggcagcc
aatagtatagctgcacaaataaagatgattaatacgttggatgattttgataccatcatt
attggccgaggtgggggctcaattgaagatttatggccattcaatgaagaagtagttgct
cgagcaatctttgcaagtaagttaccggttatttcctctgtcggacatgaaacagatacg
acaatcgccgatttagttgcagatatgcgggcagcaactccaacggccgccgctgaacta
gctacccctgtactgaccgatatcttagaagagcttcaaaaactccagctacaaactatt
gtggcgtttagaaatattttaaaaatgcgtagccagcaggttcaacatttacaacaatcg
tatatttttcaagaacctcaacgcttatatgaaggttatgtgcaaaatgttgatatttta
acggaaaagttgatttcgttggagaaacaacaaattactacagctgagggatcatttaaa
actctaaattcaagattgttagccaatactccagctagtagaattaaaatggcaaaacaa
aatgttgagcatctacgacagatgaccaataataatataactaatcgtttttcaaagtat
gcgaatgatttgaattcgctgattggatctttagatactctcagccccctcaagataatg
agtagaggttatacttatgtaactagagatacgaaggtcgttaaatcgattgaggattta
tcaattgacgataaaattcaactgaattttagtgatggtagtgcaaatgcagtaattaaa
acaattaacagcgaggataaataa
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