Pediococcus pentosaceus SL4: T256_06285
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Entry
T256_06285 CDS
T02906
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppen
Pediococcus pentosaceus SL4
Pathway
ppen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
T256_06285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppen03400
]
T256_06285
DNA repair and recombination proteins [BR:
ppen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
T256_06285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
nSTAND3
NUP214
AAA_29
AAA_28
CobU
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHA05354
LinkDB
All DBs
Position
complement(1225921..1228542)
Genome browser
AA seq
873 aa
AA seq
DB search
MPQKTSDTPMMRQYMEIKNQYPDAFLFYRIGDFYELFYDDAVKGSQLLELTLTARSKNAD
DPIPMCGVPHHAAQNYIDILVDQGYKVAICEQMEDPRTAKGMVKREVIQLVTPGTTTDKS
AEDAKENNYLTAVNFDSKTKKYGFAYTDLSTGELKVAILDDFDSVINEAVGLQTKEIVTD
ESLAESFEERFKELNILVSKQSEVEISAELSYLIQDLTSSTEIEVVKQLLTYVQTTQKRN
LAHIQKAVAYEPSFFLRMDHASKYNLELTRLIRTGKKQGTLLWLLDETKTAMGGRLLKQW
LDRPLICKKEIISRQDRVQVLVDHFFERSNLQEELTKVYDLERLAGRVAFGSVNGRDLIQ
LKTSLLQIPKVRHILEELSEPVFDDALEHLDPVSDIAELIQNAIDEDAPISVTDGDIIKD
GYHAKLDEYRDAMRNGKKWIADLQAQERATTGIKTLKIGYNKVFGYYIEVTRANLANIPE
GRYERKQTLTNAERFITPELKEKERIILEAEQKSTDLEYQLFKEIRELIKKQIERLQDLA
KQVAELDVLQSFAVVSEKYQFVKPTMTKNHAIEIKDGRHPVVEKVMGHQSYVPNDIDMDD
NTDILLITGPNMSGKSTYMRQLALTVIMAQMGCFVAASEATLPIFDQIFTRIGAADDLIS
GQSTFMVEMQEANRALKDGTSNSLVLFDEIGRGTATYDGMALAQSIIEFIHQNVHAKTLF
STHYHELTELDQSLEHLKNVHVGAVEQNGNLVFLHKMEDGPADKSYGIHVAKLAGMPDKL
LKRASVILEKLEAKDQAHSDGVETPVSKATPVESEQTPTMIEEQMALFETPTKPVKSSPK
EEVANQLEQLNLMDMTPMEVMNQLYKWQKKLRK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaaaacaagtgatacgccaatgatgcgtcagtatatggaaattaaaaatcaa
taccccgatgctttcctattctatcgaattggtgatttttatgaattattttatgatgat
gcggtcaaaggctcccagctattggaattaacgctaacagcgcgttctaaaaacgcagat
gatccgattccaatgtgtggagttcctcatcatgcagcacaaaattatattgatatcctt
gtcgaccaaggatacaaagtggcaatttgtgaacagatggaagatccacggactgctaaa
ggaatggttaaacgtgaagttatccaattggttactccaggtacaacaactgataagagt
gctgaggatgccaaagaaaataactatttgaccgctgttaattttgattctaaaactaaa
aaatatggctttgcgtatacagatctttcaactggtgaattaaaagttgcgattttagat
gattttgatagcgtgattaatgaagcagtaggattacagaccaaagaaatagtaactgac
gaaagccttgcagaaagttttgaagaacgttttaaagagttaaatattttagtgtctaag
caaagtgaagtggaaatatccgctgaattaagctatttaattcaagatttaacaagttca
acggaaatagaagttgttaagcaactacttacgtatgtgcaaactacgcagaaacgtaat
ttagctcatattcaaaaagcagtggcatatgaaccatctttctttttgagaatggaccat
gcttccaagtataatttggaactaactcgtttaattcgtacaggaaaaaaacaaggaaca
ttactgtggctgttggacgagactaaaacggcgatggggggacgtttactgaaacaatgg
ttagatcgtcccttaatctgcaaaaaagaaattattagtcgccaagatcgagttcaggtt
ttagtagatcatttttttgagcgtagtaatttacaagaagagttaacaaaagtttatgat
ttggaacgcctagctggtcgcgttgcattcggtagcgtgaatggacgagatttaatccaa
ctcaaaacatcattacttcaaattcctaaggtacgtcatattttagaggaacttagtgag
ccggtctttgatgatgctttagaacatttggatccggttagtgatattgccgagctaatc
caaaatgctattgatgaagatgcaccaatctctgttacagatggagatattattaaagat
ggttaccatgctaagttagatgagtaccgagatgcaatgcgtaatggtaaaaaatggatt
gcggatttacaggcacaagaaagagcgacaacgggaattaagacattgaagattggttat
aacaaagtttttggttactatatcgaggtaaccagagccaatttagctaatattcctgaa
ggacgttatgaaagaaaacaaactttaacaaatgcagagcgattcattacgccagaatta
aaggaaaaagaacggattattctggaagctgaacaaaaatctacggatttggaataccaa
ttatttaaagaaattcgggaattaatcaaaaagcaaattgaaagattacaagatttagct
aaacaagtggccgaattagatgtcctccagagctttgcggtggttagtgaaaaatatcag
tttgttaaaccaactatgaccaaaaatcatgcaatcgaaattaaagatggccggcatccc
gttgtcgaaaaagtgatgggacatcagagttacgttccaaatgatattgatatggatgat
aatacagacattctcttaattacgggacctaatatgtcgggtaaaagtacctatatgcgg
caacttgctttgaccgtaatcatggctcagatgggatgttttgtagccgctagtgaggca
actttgccaatttttgatcaaatatttactcgaattggtgctgcagatgacctaatttct
ggacagagtacttttatggttgaaatgcaagaagcaaaccgagctttgaaggatggaacc
agtaatagtttagttctttttgatgaaattggtcgtggtacagccacttatgatggaatg
gctttagctcaatctatcattgaatttattcatcaaaatgtccatgctaaaacgcttttt
tcgactcactatcacgagttaactgagctcgatcaatcactagaacatctcaagaatgtc
catgttggagcagtggaacaaaatggtaatcttgtctttcttcataaaatggaagacggc
cctgctgataaatcatacggaatccatgttgctaagctagcagggatgcctgataaactt
ttaaaacgtgcatccgtcattttagaaaaacttgaggctaaagatcaagctcattctgat
ggggttgagacaccagtctccaaagcaactccggttgaatcagagcaaacgccaaccatg
attgaagaacaaatggctttgtttgaaacacctactaagccggttaaatcaagtcctaaa
gaagaagttgctaaccaactggaacagttaaatttaatggatatgactcccatggaagtt
atgaatcagttatataaatggcaaaagaaacttcgtaagtaa
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