Pseudomonas putida F1: Pput_1179
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Entry
Pput_1179 CDS
T00537
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppf
Pseudomonas putida F1
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppf03021
]
Pput_1179
Transcription machinery [BR:
ppf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pput_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABQ77340
UniProt:
A5VZN0
LinkDB
All DBs
Position
complement(1329055..1331901)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVEDIDGLMVYHGLDGQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMQSALWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSAEYGLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATILGFLGAEGEALLAAVSDGDTQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLATPEQYRNLPAGEHAELYPEVAFQAQGEVADDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLPLLEGGDHKAWDTLVADARSERERLE
AELHTGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVAF
ETLNDQLESVPRASANKFVQAQRDVLAKRISGGEEKILPAHNERVAEAQRRLTAEADEEL
ARLVALQAVNPSVRDSEIDALRKRREDGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagcagagctcggc
ctgggtaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccactggc
gacacccgccagtattccctgcgcaatgcgccgctgacccgcgtgcgcttctcgccaggt
gaccagatcacccacttcgaaggctggaagctgaccgtacgcgaagtcgaggacatcgac
gggctgatggtctaccacggcctggacgggcagaatcagcctcgcaccctgcctgaaacc
cagttgtcgaacttcattcagttccgcctggccagcgaccgcctgttcgccgggcagata
gacccactgtcgtggttcagcctgcgctacaacaccctgcagcacaccagcaagcagatg
caatcggcactgtgggggttgggcggctgccgcgcacagcccatcgcccaccaactgcac
attgcccgcgaagtcgccgaccgcagcgccccgcgcgttctgctggccgacgaagtgggc
ctgggcaaaaccatcgaagccggcctggtcattcaccgccagctgctgtcggggcgcgcc
agtcgcgtactgatcctggtgccggaaaacctccagcaccagtggctggtggaaatgcgc
cggcgcttcaatctgcaagtggcgctgttcgacgccgagcgcttcatcgaaagcgacgcc
agcaacccgttcgaggatgcccaactggcgttggttgccctggagtggctggtcgacgac
gaaaaggcccaggacgcactgtttgccgctggctgggacctgatggtcgtcgacgaagcc
caccacctggtctggcacgaagaccaggtcagcgccgaatacggcctggtcgagcaactg
gcccaagtgattccgggcgtactgctgctcaccgccacccccgagcagcttggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgttttcacgacctggccgctttc
cgcgccgaaagcgagcactaccgcccggtagccgaagcggtgcaggaactgctcgacgag
ggccgcctgtcgcccaaggcccacgccaccatcctgggcttcctgggtgccgaaggcgaa
gccctgctggctgcggtcagcgacggcgacacccaggccagcgccaggctgattcgcgaa
ctgctggatcgccacggcaccggacgcgtgctgttccgtaacacccgtgcggcgattcag
ggcttccccgagcgccagttgcacccctacccgctggccacgcccgagcaataccgcaac
ctgccagccggcgagcatgccgagctgtacccggaagttgccttccaggcccaaggtgaa
gtggccgatgacgagcgctggtggcgtttcgacccacgcgtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgccatg
gacctggaggacgccctgcgcgtgcgctccggcatcccggcctcggtgttccatgaaggc
atgagcatcctcgagcgcgaccgcgccgctgcctactttgccgatgaagagtttggcgcc
caggtcctgatctgctcggaaatcggcagcgaaggccgcaacttccagttcgctcatcac
ctggtgatgttcgacctgccagcgcaccccgacctgctcgaacagcgcatcggccgcctt
gaccggattggtcagaagcacactatccagttgcacatcccgtacctgcaagacagcccg
caagagcgcctgttccagtggtaccacgaagggctcaacgccttcctcaacacctgcccc
accggcaatgccctgcagcaccagttcggcccacgcctgctgccgctgttagaaggcggc
gatcacaaggcctgggataccctggtggccgacgcccgcagcgagcgcgagcgcctggaa
gccgaactgcacactggccgtgaccgcctgctggagctcaattccggcggcgccggcgaa
ggtcaggcgctggtcgaggccattctcgaacaagacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattccgagaacgcactg
atcctcaagccgagcgagaagatgctcgatgccagcttcccgctgggcgacgatgaaggc
gtgaccatcacctatgaccgtggccaggcgctgtcacgcgaggacatgcagttcctcacc
tgggagcacccgatggtgcagggtggcatggatctggtgctgtcgggctcgatgggcaac
accgccgtggcgttgatcaagaacaaagcgctcaaaccaggcaccgtactgcttgaactg
ctgttcgtcagcgaggtggtggcaccccgcagcctgcaactgggccgctacctgccgccg
gcggcactgcgctgcctgctcgacgccaatggcaacgacctggcgtcacgcgttgccttc
gaaaccctcaacgaccagctcgagagcgtaccgcgcgccagcgccaacaagttcgtccag
gcccagcgcgatgtgctggccaagcgtatcagtggcggcgaggagaagatcctgccggcc
cacaacgagcgcgtggccgaagcccagcgccgcctcacagccgaggccgacgaagagctg
gcgcgcctggtggcattgcaagcggtcaacccaagtgtgcgtgacagcgaaatcgacgcc
ctgcgcaagcggcgcgaagatggcctggcaatgctggagaaggccgccctgcgcctggag
gccattcgcgtgctggtggctggctaa
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