Pseudomonas putida GB-1: PputGB1_4873
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Entry
PputGB1_4873 CDS
T00650
Name
(GenBank) TIM-barrel protein, nifR3 family
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
ppg
Pseudomonas putida GB-1
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppg03016
]
PputGB1_4873
Transfer RNA biogenesis [BR:
ppg03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
PputGB1_4873
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
SOR_SNZ
NanE
Pterin_bind
Motif
Other DBs
NCBI-ProteinID:
ABZ00758
UniProt:
B0KJZ4
LinkDB
All DBs
Position
5438669..5439682
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AA seq
337 aa
AA seq
DB search
MSAVRIGQYTLRNNLILAPMAGVTDQPFRTLCQRLGAGMVVSEMVSSDMSLWNSRKSSLR
RIHEGDPEPRSVQIAGGDAQMMAAAAKANVEAGAQIIDINMGCPAKKVCNKAAGSALLRD
EALVSEILHAVVGAVDVPVTLKIRTGWDRANKNGLNVAKIAEQAGIQALAVHGRTRADLY
TGDAEYDTIAAIKQAVSIPVFANGDITSPEKARAVLDATGVDGLLIGRAAQGRPWIFREI
EHYLRTGEHLPAPQLDEVERILLEHLAALHAFYGDVMGVRIARKHVGWYLATRPGGKEFR
SRFNALEDTQAQCANVRAFFSERRQSLETEDGQGVAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggtacgcatcggccaatacacactacgtaacaacctgatcctcgcgcccatg
gccggggtcacggaccagcctttccgtacactttgccagcgcctgggcgccggcatggtg
gtgtcggaaatggtcagcagcgacatgagcctgtggaacagccgcaagtcgagcctgcgc
cgcatccatgaaggcgatcccgagccacgctcggtgcagatcgccggcggtgatgcgcag
atgatggcggcggcggcgaaggccaacgtcgaagcgggtgcccagatcatcgatatcaac
atgggctgcccggcaaaaaaagtctgcaacaaagctgcaggctctgctttattgagagat
gaagccttggtcagtgagatcctccatgccgtggtcggcgctgtggacgttccggtgacc
ctgaagatccgcaccggctgggaccgggcgaacaagaacggcctgaacgtggcgaagatc
gctgaacaggccggcatccaggcgctggcggtgcatggccgcacacgcgccgacctgtac
accggcgatgccgaatacgacaccatcgctgccatcaagcaggcggtgtcaatcccggtt
tttgccaacggcgatatcacttcgccagaaaaggcccgagcggtgctggacgccaccggg
gtcgatggcctgctgattggccgggctgcccaggggcggccatggatctttcgcgagatc
gagcattacctgcgcactggcgaacatttgccagcgccgcagctggacgaagtggaacgc
atcctgctggagcacctggccgcgctgcatgccttctatggcgatgtgatgggcgttcgt
atcgcccgcaagcacgttggctggtacctggcaacacgacccggcggcaaggagtttcgc
tcccggttcaacgctttggaagacacacaagcgcagtgcgccaacgttcgcgcgtttttc
agcgaacgtcgacagagccttgagacagaggacggacaaggggtggccgcatga
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