Pseudomonas putida ND6: YSA_10609
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Entry
YSA_10609 CDS
T02170
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppi03000
]
YSA_10609
Transcription factors [BR:
ppi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
YSA_10609
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFK72517
UniProt:
I3V446
LinkDB
All DBs
Position
complement(5671097..5672014)
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AA seq
305 aa
AA seq
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MFVWLHVFACAARHLSFTRCAEELHITPGAVSQQMRQLEERLGYRLFLRRARGVELSAEG
QRLAQTVAEAYGSIEAELLRLDAGEIRGTLRVRSIPSFLAKWLTPRLPRFQQRYPDIELR
LVAEDSAQALTPGDFDLAIDLNDGSYPGMLSTPLLDEQIFPVCSPAMLRGRPPLHGPADL
AHYPLLHDITAWRGSSEYAEWEFYLEGIGAAGLDVRRGHTFNRNHLTIEAAIAGIGVAIA
RRTLLNDELERGALIVPFGVPIANHKRYVVHYPPGGLNQPGARAVHDWLVEEARGFRALH
PLNKE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtctggctgcatgtatttgcctgcgcagcccggcacttgtccttcacccgctgt
gccgaagagctgcacatcaccccgggcgcggtcagccagcagatgcgccagctggaagag
cgcctgggctaccggctgttcctgcgccgggcgcgcggcgtggagctgagcgccgagggg
caacgcctggcccagacggtggcggaagcctacggcagtatcgaagccgaactgctgcgg
ctggacgcgggggaaatccgcggcacattgcgtgtgcgttcgatcccctcgttcctggcc
aaatggctcacgccgcgcttaccgcgttttcaacagcgctacccggatatcgaactacgc
ctggtcgccgaagacagcgcccaggcgctgaccccgggtgacttcgacctggccatcgac
ctgaacgatggtagctacccaggcatgctctcgacgccgctgctggacgagcagatcttc
ccggtgtgctcacctgccatgctgcgcgggcgaccgccgctgcacggccccgctgacctg
gcgcactacccactgctgcacgacatcaccgcctggcgtggcagttcggaatatgccgag
tgggagttctacctggaaggcatcggcgccgccggcctggatgtacggcgcgggcacacc
ttcaaccgcaaccacctgaccatcgaggcggcgattgccggtatcggcgtggcgattgca
cgacgcacgctgctcaatgacgaactggagcgcggcgcactgatcgtgccctttggtgta
ccgatcgccaaccacaagcgttatgtggtgcattacccgccaggcggcttgaaccagcca
ggtgcgcgggcggtgcatgactggctggtggaagaagcgcgggggttcagggcgttgcat
ccgttgaacaaggaatag
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