Phaeobacter piscinae: PhaeoP14_01315
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Entry
PhaeoP14_01315 CDS
T05105
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein Ssb
KO
K03111
single-strand DNA-binding protein
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03030
DNA replication
ppic03430
Mismatch repair
ppic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP14_01315 (ssb)
03430 Mismatch repair
PhaeoP14_01315 (ssb)
03440 Homologous recombination
PhaeoP14_01315 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_01315 (ssb)
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_01315 (ssb)
03029 Mitochondrial biogenesis [BR:
ppic03029
]
PhaeoP14_01315 (ssb)
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PhaeoP14_01315 (ssb)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PhaeoP14_01315 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
PhaeoP14_01315 (ssb)
Mitochondrial biogenesis [BR:
ppic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
PhaeoP14_01315 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Keratin_2_head
Motif
Other DBs
NCBI-ProteinID:
ATG39421
UniProt:
A0A0C2L730
LinkDB
All DBs
Position
complement(1399958..1400488)
Genome browser
AA seq
176 aa
AA seq
DB search
MAGSVNKVILIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERREKTEWHSVAIF
SEGLVRVAEQYLRKGSKVYIEGQLQTRKWQDQSGQDRYSTEVVLQGIGGTLTMLDGRNDG
GQGGGGGGYGGGSGGGYGGGGGGYDSGQGGGNQGGGFGGGNQGGASHNIDDDEIPF
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctcagtcaacaaagtaatcctgatcggcaacctcggccgtgatcccgaagtg
cgcagtttccagaacggcggcaaggtctgcaacctgcggatcgccacctcggaaacctgg
aaagaccgcaacaccggcgagcggcgcgagaaaaccgaatggcattcggtcgccatcttc
tccgaaggtctggtccgcgtggcagagcagtacctgcgcaaaggatccaaggtctatatc
gaaggccagttgcagacccgtaaatggcaggaccagagcggccaggaccgctattcgacc
gaggtcgtcctgcagggcatcggcggcacgctgaccatgctcgatgggcgcaatgacggc
ggccagggcggcggcggcggcggctacggtggtggcagcggcggcggctatggtggtggc
ggtggtggctacgacagcggtcagggtggcggtaatcagggcggtggctttggcggcggc
aaccagggtggcgcgtcacacaacatcgacgatgacgagatcccgttctaa
DBGET
integrated database retrieval system
