Paenibacillus polymyxa SC2: PPSC2_03945
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Entry
PPSC2_03945 CDS
T01335
Symbol
yhbA
Name
(GenBank) [Fe-S]-binding protein
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppm03016
]
PPSC2_03945 (yhbA)
Enzymes [BR:
ppm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
PPSC2_03945 (yhbA)
Transfer RNA biogenesis [BR:
ppm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PPSC2_03945 (yhbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
Fer4_16
QueG_DUF1730
HEAT_2
Methyltransf_1N
HEAT_PBS
HEAT_EZ
Fer4_10
Fer4_7
Fer4
HEAT
Arm
Fer4_6
Fer4_9
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
ADO54777
UniProt:
E3ECK5
LinkDB
All DBs
Position
884074..885807
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AA seq
577 aa
AA seq
DB search
MQRELTRTATGTASTWASLKQEIIEAAPGLGIDSIGFASADPFLSLKAILEEHRAKGYES
GFEEPDIDKRIYPELYGSQPASLIAIAVAYPSKMKDPPKSDKGKYRGILARSAWGKDYHL
VLREAMEKLEAFISERVPDAILKNMVDTGELSDRAVAERAGIGFSGKNTMMISPTLGSWI
YLGELLTNIPFQPDEPVTDGCGECTKCLDACPTGALVGPGQLNAQRCVSFLTQTKGFLDE
EFMLKIGNRLYGCDTCQIVCPKNRGLNWAHHPELTPDPEIVKPLLLPLLDLSNREFKDRF
GQSAAAWRGKKPIQRNAVIGLGNFKDVSAVPKLTEVLLDDPRPELRGTAAWALSRIGGEN
AMTAIKQASEKEQHEQVREMIAQAHSKLEEQEQAEQQTSAELKAEDSQGPTTIYYDEMET
PVGTLTLCATDRGLCRIDYGSFYAKEALLQQWARTWVGEYVYVQEPEKLREAAEQLREYF
AGERREFSIAYDLRGTPFQEQVWRALQNIPYGQSVSYQDIAESIGRAKAVRAVGGANNKN
PLPILFPCHRVSGANGSLVGYAGGLPVKMKLLELEKE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgaattaactcggacggctaccggaacggcctcgacttgggcttcgctcaag
caggaaattattgaggcagctccagggctgggtatcgactccatcgggttcgcatccgcc
gatccctttctgtctctgaaggctatattggaagagcatcgtgctaaaggctatgagtcc
ggctttgaagagcccgatattgataagcgcatctatccggagctgtatggctcgcagcct
gcatccctgattgccattgcggtggcgtatccttccaaaatgaaggacccgccgaagtcg
gacaagggcaagtaccgtggtattttggcgcgttcagcctggggcaaagattatcatctg
gtattgcgcgaagcgatggaaaagcttgaggcttttataagtgaacgggtacctgatgca
attttaaaaaacatggtggataccggagagctgtcggatcgagctgttgcggaacgcgca
gggattggctttagcggcaaaaatacgatgatgatttcaccgacactgggatcatggatt
tatctgggggagctgttgacgaacattcctttccagccagatgaaccggttacggatggt
tgcggagagtgcaccaaatgtttggatgcatgtcctaccggcgcgcttgtaggtccggga
cagctgaatgcccagcggtgtgtgtcctttttgacgcaaaccaagggctttttggacgag
gagtttatgctgaaaatagggaatcggctgtatggatgtgatacgtgccaaatcgtatgt
cccaaaaatcgaggccttaactgggctcatcatcccgagcttacacccgatcctgaaatt
gtgaagccgttgctgttaccgttactggatttgagcaatcgcgaattcaaagaccgattt
ggtcagagtgcagcggcttggcgggggaagaagccgattcaacgcaatgcagtcattggt
cttggcaatttcaaggatgttagcgcggtgcccaaattgacggaggttttattggatgat
ccgcgtcccgagctgcgaggcacggcggcgtgggctttgagtcgaataggaggggaaaac
gctatgacagcgatcaagcaagcatcagagaaagaacaacatgagcaagtacgcgaaatg
atcgcacaggcgcattccaagctagaggaacaagagcaggcagagcagcaaacttctgct
gaattaaaggcggaggattcacagggtccaactacgatttattatgatgagatggagacg
cctgtgggcacgctgacgctgtgtgctacggatcgtgggctatgtcgaattgactatggc
tctttttatgcgaaggaagcattgcttcagcaatgggcccggacatgggtcggggaatat
gtctatgtacaggagccggaaaagctgcgcgaagctgcagaacaactgcgtgaatatttt
gcgggagaacgacgggaattcagtatagcctatgatttgagaggcactccttttcaagag
caggtatggcgcgcactgcaaaatattccgtacggacaaagtgtgtcctatcaagatatt
gcagaatcgatcggacgagccaaggcggtacgtgctgtcggcggagccaataacaaaaat
ccattgccaatcctgtttccatgtcacagggtatcaggtgcaaatggaagtttggtcggc
tatgccggaggcttgccagtcaagatgaagctgctggaattggagaaggaataa
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