Paenibacillus polymyxa CR1: X809_03070
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Entry
X809_03070 CDS
T02956
Name
(GenBank) helicase SNF
Organism
ppol
Paenibacillus polymyxa CR1
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Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD
Motif
Other DBs
NCBI-ProteinID:
AHC18298
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Position
complement(663554..666919)
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AA seq
1121 aa
AA seq
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MSFELTRRAIRQLCSQAAYDDGDAYYRAKRVAFTQIDHDEGVYEATVKGSSFYAVAAMIR
SNGSIRAECTCSTFQNTGRYCKHIAAVLLNAHDIRRGKSLSVRSYASRLHPGTTPDTAGS
MDSDGMYTSTDAPYDYTAKTARSSDITQGDLQLTDSMLKLFDRKRPLRSTPTLLDTRAVL
DFQFVIRPFAYGYQKYMFGVEMKAGPKRLYIVQKIRPFLDSIDRGDSYMFTKSFSYEPEL
YRFRPEHDAILQQLSQVCHHERMIRETSGTYSSSSSHMSGERMLLIPPAAWEKLLPLLTT
AQGVYFEIHGNMSEGIPQSDLMLPLQFEFDEAGAITEGYQLSIQGLDDLTIMEDYGVVIA
DGKLVKQKADPLRRLSELKRMVEVHHRRKVLIAPEQMESFMDKVVPGLMKLGRVHMTRSV
SDRVTQQPLKAKLYLDRVRDKLLAGLEFQYGDIIINPLETDARTPGNDRILIRDGEQEQR
ILELMEHSSFARTDSGYFMEDEDAEYDFLYHTVPQLEKLLDVYATGAVKAKINNTLPTPR
IRAEWDERTDWLEFKFDMEGIPEPEIRKLLKSLEEKQRYHRLPNGALLPLETEEYKELIR
FMNETGIRKSDLDAAQIRVPVTQGLYLIDPHDHGKNLTLGKTFRQLLENIRNPDHLDFPV
PDVLAPILRDYQVYGFQWLKTLAHYRFGGILADDMGLGKTLQSIAFLVSVLPEIRSQQLP
AMIVSPASLVYNWRNELEKFAPHVRVTIADGSPEERGRIIRDAASYDVVITSYPLLRRDA
DVYSKPSFHTLILDEAQAFKNHATQTAQAVKDVKARYRFALTGTPIENTLEELWSIFDVV
FPALFPGGKRVFHNLPRNVIAKRVRPFLLRRLKSDVLKELPEKIESVQVSRLLPDQKKLY
TAYLAKLQHETLKHLNEEGFQKNRIKILAGLTRLRQLCCHPGLFIEGYTGSSAKFEQLLE
IITECLSSGKRILIFSQFTTMLQMIGRELAREGVSYFYLDGQTPAPERVELCSRFNEGER
ELFLISLKAGGTGLNLTGADTVILYDLWWNPAVEEQATNRAHRMGQKKVVQVIRLVAQGT
VEDKMYELQQKKKNMIDQVIQPGQETLSALTELEIRELLMI
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaacttacccggcgagccatcagacaactatgcagtcaagctgcttatgac
gacggggatgcctattaccgggccaaaagagtggcctttacacaaatagatcatgatgaa
ggggtatacgaagctacggtcaaaggaagcagcttttatgctgttgcggcgatgatccga
tccaatggaagtatccgagcagagtgcacctgtagcacatttcagaacaccggacgatat
tgcaaacatatcgctgctgttctccttaacgcccatgatatacgccgtggaaaaagtctg
tctgtacgctcctacgcctccagacttcatcccggtactaccccagatacagcaggaagc
atggattcagacgggatgtacacatctacagatgctccgtatgattacactgctaaaacg
gcacgatcctctgacatcacacaaggggatctccagctgaccgacagtatgttaaaacta
tttgaccgcaagcgaccgcttcgcagcacgcctaccctgctggatactcgtgcggtcttg
gattttcaattcgtcatccggccttttgcctacggttaccaaaaatatatgtttggtgta
gaaatgaaggctggccccaaacgattatatatcgtccagaaaattcgtccgtttctggat
agtattgaccgtggggatagctacatgttcacgaaaagcttctcgtacgagcctgagttg
taccgcttccgacctgaacatgacgctattctccagcaattatcccaggtgtgccaccat
gagcgtatgattcgggaaacctcaggcacgtattcatcttccagtagccatatgagcggc
gagcgaatgctcctcattccgcctgcggcttgggaaaagctgctccccttgctgacaaca
gcacagggcgtctactttgaaattcacggaaacatgagtgagggtattccccagtccgac
ctgatgcttccactgcaatttgaatttgatgaggccggggccataaccgaaggctaccag
ctaagcatacaaggattggatgacttgaccatcatggaggactatggtgtcgtcattgcc
gatggcaagcttgtcaaacagaaggccgatcccttacggcgtttgtccgagctaaaacgg
atggtagaggtacaccacaggcgaaaagttctgattgcgccagagcagatggaatctttt
atggacaaggttgtacccgggttaatgaagctcggacgtgttcatatgactcggtccgtc
tcagatcgggtcacacagcagccattgaaggcaaagctatatctggaccgggtaagagac
aagctactggcagggctggagttccaatatggggatatcatcatcaacccgctggaaaca
gatgcacgaacgcctggtaacgaccgaattctgatacgtgatggggaacaggagcagcgt
attttggaactgatggagcatagctcctttgccagaacagacagcggatattttatggaa
gatgaagatgcagagtatgattttttgtaccatactgttcctcaactggaaaagctgctg
gacgtctatgctacaggtgcagtcaaagcgaaaataaacaatactctgcctaccccaagg
atacgggcggaatgggatgaacgtacggattggcttgaatttaaatttgatatggagggc
attccggaaccggaaattcgcaaactgctcaaatcgttagaggaaaaacagagatatcac
cgtctgcctaatggtgccttgctgccgctggaaacagaggagtacaaggaattgattcgg
ttcatgaatgaaacaggtatccgtaaaagtgatctggatgcagcgcaaattcgtgttccc
gtcacacaaggactgtatttaattgatcctcacgatcatgggaaaaacctgactttgggt
aaaacctttcgccagctgctggaaaatatacgtaacccagaccatctcgactttccagtt
ccagacgtgcttgctcctatcttgagagattatcaggtttacggctttcaatggcttaag
acattggcgcattaccgttttgggggcattttggcagatgatatggggctgggtaaaacg
ctgcaaagtatcgcctttctcgtctcagtattgccggagattcgcagccagcagcttcca
gccatgatcgtgtcccctgcatcactggtgtacaactggcggaatgagctggagaaattt
gctccacacgtccgcgtcactatcgcagatggcagcccggaagaacgcggccggatcata
cgggatgccgccagttatgacgtcgtcattacgtcctacccgctgctacggcgcgatgca
gatgtgtacagcaaaccatcgtttcatacgctcatactggacgaggcgcaggctttcaag
aaccatgccacccagacggcacaagctgttaaggatgtaaaagcccgttaccgttttgcc
ctgacaggaacgcctatagaaaatacattggaagagttatggtccatattcgacgttgta
tttcctgcgctatttcccggtgggaaaagagtgtttcacaacctgcctcgaaatgtgatt
gccaagcgggttcgtccgtttctgttgcgccgtcttaagagcgatgtcctcaaggagctg
ccggagaaaatcgaatccgtgcaggtatcccggcttctgccagatcaaaaaaagctgtat
acagcctatctggccaagctccagcatgaaacgttgaagcatctcaacgaggaaggattt
cagaaaaatcggatcaaaattctcgcaggtctgacccgacttcgtcagctctgctgtcat
ccgggcttgttcatcgaaggatatacgggaagctccgccaaatttgaacagctgttggag
atcattacggaatgtctcagctccgggaaacggatactcattttttcacagttcactacg
atgcttcaaatgatcggacgtgagcttgctcgagaaggggtgtcctacttttacctggat
gggcagactcccgctccggaacgagtcgagctgtgtagtcgcttcaatgaaggagaacgc
gagctgttcctgatctccctaaaggcaggaggcactggcctgaacctcaccggcgcagat
acagtcattctgtatgacctgtggtggaatcccgctgtagaggagcaggctaccaaccgc
gcacaccgaatgggtcagaaaaaagtcgtacaggttattcgtctcgtcgcccaaggcacg
gtagaggataaaatgtatgagctgcaacaaaaaaagaaaaacatgatcgaccaggtcatt
caaccggggcaagaaaccctttcggcactgaccgagctggagattcgtgaactgctcatg
atctag
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