Pseudomonas protegens CHA0: PFLCHA0_c43420
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Entry
PFLCHA0_c43420 CDS
T02671
Symbol
ycfS
Name
(GenBank) putative L,D-transpeptidase YcfS
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprc01002
]
PFLCHA0_c43420 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pprc01011
]
PFLCHA0_c43420 (ycfS)
Peptidases and inhibitors [BR:
pprc01002
]
Cysteine peptidases
Family C82
PFLCHA0_c43420 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
pprc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PFLCHA0_c43420 (ycfS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
AGL86101
UniProt:
A0A2C9ER69
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All DBs
Position
complement(4917227..4918201)
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AA seq
324 aa
AA seq
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MLPRLPVVTRCLTLAALCVAGPVAALELPLPPPGEDIVGQVQVIKAKYEDTFADLGTTYD
LGYLEMVAANPGVDPWLPGAGTEVILPTRFILPPGPREGIVINLAEYRLYYYPKGRNVVY
TFPLGIGREGWGSPIAHTSITAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGP
FKFTLGTPGYLIHGSNKKFGIGMRTSHGCFRMLNNNVLEMAGMVPVGTSVRIINDPYKFG
ISGGKVYLEAHTPLDDKGNPSVVDKHTAVINALLKREDLANNLRMNWDVVRDVVAAEDGL
PVEIAVPTTAPVTTMSNATYDLQQ
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttgccccgcctccctgtcgtcacccgctgcctgacactcgccgccttgtgtgtggcc
ggtcctgttgccgcattggaattgcctctaccgccgccgggtgaagacatcgtcggccag
gtacaggtgatcaaggccaagtacgaggataccttcgccgacctgggcacgacctacgac
ctgggttacctggaaatggtcgcggccaacccgggggtcgatccatggctgccgggggcg
ggcaccgaggtgatcctgcctacgcgtttcattctgccgcccgggccgcgcgaaggcatc
gtgatcaacctggccgagtatcgactgtactactaccccaagggtcggaacgtggtctac
accttcccgctgggtattggtcgtgaaggctgggggtcaccgatcgcgcacaccagcatt
accgcgaaaaccccgaatccgacctggacgcccccggcgtcgatcaaggccgagcatgcc
gccgacggtgaccccttgccgaacgtggtaccggccgggccggacaaccccttggggcca
ttcaagttcacacttggcacgccgggttacctgattcacggttcgaacaagaagttcggt
atcggcatgcgcaccagccacggttgtttccgcatgctcaacaacaacgtgctggaaatg
gccggcatggtgccagtgggaacttcggtgcgcatcatcaacgatccgtacaagttcggt
atcagcggcgggaaagtctacctggaagctcatacgccgttggatgacaaaggcaatcct
tcggtggtcgacaagcacaccgcagtgatcaatgccttgctcaagcgtgaggacctggct
aacaacctgcgcatgaactgggatgtggtgcgtgatgtagtggcagccgaagatggcttg
ccggtggagatcgccgtgccgacgacagcgcctgtgacaacaatgtccaacgcgacctac
gatttgcagcagtaa
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