Pseudomonas protegens Cab57: PPC_0682
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Entry
PPC_0682 CDS
T03613
Name
(GenBank) tRNA-dihydrouridine synthase B
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_0682
Transfer RNA biogenesis [BR:
ppro03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
PPC_0682
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
SOR_SNZ
His_biosynth
DHO_dh
NanE
PEP_mutase
DeoC
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
BAO60029
LinkDB
All DBs
Position
complement(775717..776730)
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AA seq
337 aa
AA seq
DB search
MSAVRIGPYTVHNGLILAPMAGVTDQPFRQLCKQLGAGLVVSEMVTSDMSLWNSRKSRLR
MIHEGDPEPRSVQIAGGDAQMLADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKD
EALVNEILQAVVAAVDVPVTLKIRTGWDRENKNGLTVAKIAEQAGITALAVHGRTRADLY
TGEAEYDTIAAIKQAVSIPVFANGDIDSPEKARRVLHATGADGLLIGRAAQGRPWIFREI
EHYLSTGETLPAPELFEVERILLEHLAALHAFYGDVMGVRIARKHVGWYLATLPGAREFR
AHFNRLEDTEAQCANVREFFAGRYKSLETGDGEGVAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggtacgcatcggcccatatacagtgcacaacggtttgattctcgccccgatg
gcgggggttacagaccagccctttcgtcagctttgcaagcaattgggcgcgggccttgta
gtctcggaaatggtcaccagcgacatgagcttgtggaacagccgcaaatcgcggttgcgc
atgatccacgaaggcgatcccgagccccgctcggtgcagattgccgggggtgatgcacag
atgctggcagacgccgcccgcgccaacgtcgagttgggcgcacagattattgatatcaac
atgggttgcccggccaagaaggtctgcaacaaggccgccggctccgcgttgctgaaggac
gaagccctggtcaacgagattctccaggcagtagtggccgctgtggatgtaccggtcacc
ctgaagatccgcaccggctgggaccgggagaacaagaacggcctgacggtggcgaagatc
gccgagcaggccggcatcacggcactggcggtccatggtcggacccgggccgacctgtac
accggtgaagccgagtacgacaccattgccgcgatcaagcaggcggtgtcgatcccggtc
tttgccaatggcgatatcgactcgccggaaaaggcccggcgggtgttgcacgccaccggc
gccgacgggctgttgatcggccgggccgcccaggggcggccatggatttttcgtgagatc
gaacactacctcagtaccggtgaaaccctcccggcaccggagctgttcgaggtggaacgt
attctgctagagcacctggccgcgctgcatgccttctatggagatgtcatgggcgtacgc
attgcgcgcaagcatgtgggctggtatctcgcaaccctgccgggcgccagggagtttcgc
gcccacttcaatcgtttggaagatacggaagcacaatgcgccaacgttcgtgagttcttt
gccggacgttacaagagcctggaaacaggggacggagagggggtggccgcatga
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