Pseudomonas protegens Cab57: PPC_4715
Help
Entry
PPC_4715 CDS
T03613
Symbol
oprB
Name
(GenBank) carbohydrate-selective porin OprB
KO
K07267
porin
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_4715 (oprB)
Transporters [BR:
ppro02000
]
Other transporters
Pores ion channels [TC:
1
]
PPC_4715 (oprB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
BAO64062
LinkDB
All DBs
Position
complement(5252937..5254286)
Genome browser
AA seq
449 aa
AA seq
DB search
MKKQHSNTRLLCQLSAVAALVLSGNAMADEAFSADSKWMTGDWGGERTKLIEQGIDIKAD
YVGEMGANLHGGYNDDKTGRYSDQFGLGVAFDLQKLLGWDNTQAKIQLTNRNGQNISNDR
IGDPRAGTLSSSQEVYGRGHMVRLTQLWVQHQFLDGKLDVKAGYFGEGEDFNTFPCDFQN
LAFCGSQVGNWATGIWYNWPVSQAALRIKYNITPELYAQIGAYNQNPSQLEHGNGFKLSG
SGTKGTVLPVELVWSPKLNSLPGEYRVGYYKSTADANDVRKDVNGQDAANTGDAYRVHNS
KHGYWFVGQQQLTTHNGDASRGLNIAANATFHDKDTNVVDNYQSLMFVYKGPFDARPKDD
VGIGFARIHVNDDVRKNAQLINEDNGISNYDNPLYMPLRDTEYNYEINYGFHVTNWLTVR
PNLQYITHPGGVDEVDNALVAGLKIQSVF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcaacacagcaacacccgattgctctgccagttgtcggcggtggcggccctg
gtcctgtccggcaatgccatggccgatgaggcgttcagcgctgattcgaaatggatgacc
ggcgactggggcggtgagcgcaccaagctgatcgagcaggggatcgacatcaaggccgac
tacgtcggtgaaatgggcgccaacctgcatggcggttacaacgacgacaagaccgggcgc
tacagcgaccagttcggcctgggcgtggcgttcgacctgcagaagctgctgggctgggac
aacacccaggccaagatccagctgaccaaccgtaacggccagaacatctccaacgaccgc
atcggcgacccgcgtgccggcaccttgagctcctcccaggaggtctatggccgggggcac
atggtccgcttgacccagttgtgggttcagcaccagttcctcgacggcaagctggacgtc
aaggccggctacttcggcgaaggcgaagacttcaacaccttcccctgcgacttccagaac
ctggcgttctgcggctcccaggtgggcaactgggccaccggcatctggtacaactggccg
gtcagccaggcggcgctgcgcatcaagtacaacatcacccccgagctgtatgcgcaaatc
ggcgcctacaaccagaacccgtcgcaactggagcacggcaacggcttcaagctcagcggc
agcggcaccaagggcaccgtgttgccggtggaactggtctggtcgcccaagctcaacagc
ctgccgggcgagtaccgcgtcggttactacaagagcacggccgatgccaatgatgtgcgc
aaggacgtcaatggtcaggatgccgcgaacacgggtgatgcctatcgcgtgcacaacagc
aagcacggctactggttcgtcgggcagcagcaactcaccacccacaacggtgatgcttcc
cgcggtctgaacatcgccgccaacgccaccttccacgacaaggacaccaacgtcgtcgac
aactaccagtcgctgatgttcgtgtacaaggggccgttcgatgcgcgtcccaaagatgac
gtcggcatcggttttgctcggatccacgtcaacgacgatgtgcgcaagaacgcccagctg
atcaacgaggacaacggcatcagcaactacgacaacccgctgtatatgccgctgcgcgac
accgaatacaactacgagatcaactacggcttccacgtcaccaactggctgaccgtgcgc
cccaacctgcaatacatcacccacccgggtggtgtggatgaagtcgacaacgcgctggtg
gccggcctgaaaattcagtcggtgttctaa
DBGET
integrated database retrieval system