Pseudomonas protegens Cab57: PPC_5585
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Entry
PPC_5585 CDS
T03613
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPC_5585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppro02000
]
PPC_5585
Transporters [BR:
ppro02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PPC_5585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_22
nSTAND3
AAA_25
Rad17
DUF1513
AAA_28
FeoB_N
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAO64932
LinkDB
All DBs
Position
complement(6177762..6178886)
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AA seq
374 aa
AA seq
DB search
MSEVVSSAGANDVLVSFRGVQKSYDGENLIVKDLNLEIRKGEFLTLLGPSGSGKTTSLMM
LAGFETPTAGEIQLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGLSKT
DISERVKRVLSMVQLDAFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQL
REHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNT
FVANFIGENNRLNGRLHSHNGERCVVELGRGEKVEALAVNVGQVGGPVTLSIRPERVSLN
GSSENCVNRFSGRVAEFIYLGDHVRVRLEVCGKSDFFVKQPIAELDPALAVGDVVPLGWQ
VEHVRALDPLLEAN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtcgtttcaagtgctggggccaacgatgttctggtcagctttcgtggtgtg
cagaagagctacgacggcgagaacctgatcgtcaaagacctcaacctggaaattcgcaaa
ggcgagttcctcaccctgctggggccgtccggttccggcaagaccaccagcctgatgatg
ctggccggtttcgaaaccccgaccgccggcgagatccagctggccgggcgctcgatcaac
aatgtgccgccgcacaagcgcgacatcggcatggtgttccagaactacgcgctgttcccc
cacatgaccgtggccgagaacctggcctttccgctgtcggtacgcggcttgagcaagacc
gacatcagcgagcgggtcaagcgggtgctgagcatggtccagctcgacgctttcgcccaa
cgctacccggcccagctgtccggcggccagcagcagcgggtggccctggcccgggccctg
gtgttcgagccacagctggtgctgatggacgaaccccttggtgccctcgacaagcaactg
cgcgaacacatgcagatggagatcaagcacctgcaccagcgcctgggcgtgaccgtggtc
tatgtgacccacgaccagggcgaagccctgaccatgtccgaccgggtggcggtgttccac
cagggcgagatccagcagatcgcgccgccgcgcactctctacgaagagccgaagaacacc
ttcgtcgccaacttcatcggcgagaacaaccgcctcaacggccgcctgcacagccacaac
ggcgagcgttgcgtggtggagctggggcgtggcgagaaggtcgaggcgctggcggtgaat
gtcggccaggtcggcggcccggtgaccttgtccatccgcccggagcgggtgagcctcaac
ggttccagcgaaaactgcgtcaaccgcttctccggccgggtggcggaattcatctatctg
ggcgaccacgtccgggtgcgcctggaagtctgcggcaagagcgacttcttcgtgaaacag
ccgattgccgagctcgatcctgcgctggcagtgggtgacgtggtgccgcttggctggcaa
gtcgagcacgttcgcgcgctcgatccgcttctagaggcgaattga
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