Pan paniscus (bonobo): 100985471
Help
Entry
100985471 CDS
T02283
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pps
Pan paniscus (bonobo)
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pps03000
]
100985471 (SOX13)
Transcription factors [BR:
pps03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100985471 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100985471
NCBI-ProteinID:
XP_003823023
Ensembl:
ENSPPAG00000029460
UniProt:
A0A2R9A6Q0
LinkDB
All DBs
Position
1:179675017..179730628
Genome browser
AA seq
622 aa
AA seq
DB search
MSMRSPISAQLALDGVGTMVNCTIKSEEKKEPCHEAPQGSATAAEPQPGDPARASQDSAD
PQAPAQGNFRGSWDCSSPEGNGSPEPKRPGASEAASGSQEKLDFNRNLKEVVPAIEKLLS
SDWKERFLGRNSMEAKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAML
FEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLP
VTPDSQLALPIQPIPCKPVEYPLQLLHTPPAPVVKRPGAMATHHPLQEPSQPLNLTAKPK
APELPNTSSSPSLKMSSCAPRPPSHGGPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQL
LHSHSGALDGSPNTPFRKDLISLDSSPAKERLEDGCVHPLEEAMLSCDMDGSRHFPESRN
SSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARL
SRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVIPPQAGQVQMS
SSDVLYPRAAGMPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEGTDDRHSVADGEMYR
YSEDEDSEGEEKSDGELVVLTD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccatctctgcccagctggccctggatggcgttggcaccatggtg
aactgcaccatcaagtcagaggagaagaaagagccttgccacgaggccccccagggctca
gccactgccgctgaacctcagcctggagacccagcccgggcctcccaggatagtgctgac
ccccaagctccagcccaggggaatttcaggggctcctgggactgtagctctccagagggt
aatgggtccccagaacccaagagaccaggagcgtcggaggctgcctctggaagccaggag
aagctggacttcaaccgaaatttgaaagaagtggtgccagccatagagaagctgttgtcc
agtgactggaaggagaggtttctaggaaggaactctatggaagccaaagatgtcaaaggg
acccaagagagcctagcagagaaggagctccagcttctggtcatgattcaccagctgtcc
accctgcgggaccagctcctgacagcccactcggagcagaagaacatggctgccatgctg
tttgagaagcagcagcagcagatggagcttgcccggcagcagcaggagcagattgcaaag
cagcagcagcagctgattcagcagcagcataagatcaacctccttcagcagcagatccag
caggttaacatgccttatgtcatgatcccagccttccccccaagccaccaacctctgcct
gtcacccctgactcccagctggccttacccattcagcccattccctgcaaaccagtggag
tatccgctgcagctgctgcacaccccccctgccccagtggtgaagaggcctggggccatg
gccacccaccaccccctgcaggagccctcccagcccctgaacctcacagccaagcccaag
gcccccgagctgcccaacacctccagctccccaagcctgaagatgagcagctgtgcgccc
cgcccccccagccatggaggccccacgcgggacctgcagtccagccccccgagcctgcct
ctgggcttccttggtgaaggggacgctgtcaccaaagccatccaggatgctcggcagctg
ctgcacagccacagtggggccttggatggctcccccaacacccccttccgtaaggacctc
atcagcctggactcatccccagccaaggagcggctggaggacggctgtgtgcacccactg
gaggaagccatgctgagctgcgacatggatggctcccgccacttccccgagtcccgaaac
agcagccacatcaagaggcccatgaacgccttcatggtgtgggccaaggatgagcggagg
aagatcctgcaagccttcccagacatgcacaactccagcatcagcaagatccttggatct
cgctggaagtccatgaccaaccaggagaagcagccctactatgaggaacaggcgcggctg
agccggcagcacctggagaagtatcctgactacaagtacaagccgcggcccaagcgcacc
tgcattgtggagggcaagcggctgcgcgtgggagagtacaaggccctgatgaggacccgg
cgtcaggatgcccgccagagctacgtgatccccccgcaggctggccaggtgcagatgagc
tcctcggatgtcctgtaccctcgggcagcaggcatgccgctggcacagccactggtggag
cactatgtccctcgtagcctggaccccaacatgcctgtgatcgtcaacacctgcagcctc
agagaggagggtgagggcacagatgacaggcactcggtggctgatggcgagatgtaccgg
tacagcgaggacgaggactcggagggcgaagagaagagcgatggggagttggtggtgctc
acagactaa
DBGET
integrated database retrieval system