KEGG   Pseudomonas versuta: AOC04_11970
Entry
AOC04_11970       CDS       T04081                                 
Name
(GenBank) DNA repair protein
  KO
K10979  DNA end-binding protein Ku
Organism
ppsy  Pseudomonas versuta
Pathway
ppsy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ppsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AOC04_11970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppsy03400]
    AOC04_11970
DNA repair and recombination proteins [BR:ppsy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AOC04_11970
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ALE88864
LinkDB
Position
complement(2721075..2721965)
AA seq 296 aa
MPRAIWKGAISFGLVHIPVALVSATSQQGIDFDWLDKRSMDPVGYKRVNKVTGKEITKEN
IVKGVQFEKGRYVVISEDEIKQAHPRSTQTIDIFAFVESKKIPLQHIDTPYFLAPDKRGE
KVYALLRQALVDTSKVALAKVVIRTSQHLAAVIPMDAAIVLVLLRWPAEVRSLDSLELNK
DVTEAKLNKSELKMAKRLVEDMAADWEPDKYRDTFQEQIMALVETKASEGKIENVETNTR
DEEQRKTADVIDLAELLKRSLGSKKSQIPTEKSKSAAKPKAKKLVEAEPEKKRHSK
NT seq 891 nt   +upstreamnt  +downstreamnt
atgcctcgggcaatttggaagggagcaatcagtttcggactcgtacacattcctgtggct
ttggtgtctgccacctctcaacaaggtatcgatttcgattggctggacaagcgcagtatg
gaccctgttggctacaaacgggtcaacaaggtcactggaaaagagattactaaggagaac
atcgtcaaaggtgttcagtttgaaaaaggacgatatgtagtcatcagcgaagacgaaatt
aagcaagctcacccgcgctcgacgcaaaccatcgatatttttgcttttgttgagagtaaa
aaaatccccttgcaacacattgatacgccgtattttctggctcctgataagcgaggagaa
aaagtttatgcgttgttacgtcaagcgctggttgatacgagcaaggtagccttggctaaa
gtagttattcgcacaagccagcatttagcagctgtcatccctatggatgcagcaatcgtt
ttagtattactacgatggccagctgaagtgcgcagtcttgattcgcttgaacttaacaag
gatgtaactgaagctaaactgaataaaagcgaactaaaaatggctaaacgtttggtcgag
gacatggcagcagattgggaaccagacaagtatcgagatacctttcaagagcaaattatg
gcattggtcgagactaaagccagtgaaggtaagattgaaaacgtagaaactaatacccgg
gatgaggaacagcgaaaaacggccgatgttattgaccttgcagagctgctcaagagaagc
cttggtagcaaaaaatcgcagattcccactgaaaaatcaaaatctgcagcaaagccgaaa
gctaagaaattagtggaggcggagccagaaaaaaagcgacatagtaaataa

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