KEGG   Pseudomonas putida DLL-E4: DW66_4897
Entry
DW66_4897         CDS       T03439                                 
Name
(GenBank) type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
ppud  Pseudomonas putida DLL-E4
Pathway
ppud02025  Biofilm formation - Pseudomonas aeruginosa
ppud03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DW66_4897
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    DW66_4897
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppud02044]
    DW66_4897
Secretion system [BR:ppud02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DW66_4897
SSDB
Motif
Pfam: T6SS_HCP HTH_Tnp_4
Other DBs
NCBI-ProteinID: AHZ79395
UniProt: A0A059V2V6
LinkDB
Position
5374791..5375279
AA seq 162 aa
MAFDAYIQIDNIPGEALDKQYSKWIEVLGYDFGVSQSTSATASSTGGATSGRTSVTNFTF
TKYLDSASCKLMEASCTGQHLKEVKLALCRAGGDKLKYYEIILEEVIIAEYSQSVDTGVP
LEVVQLNYGRIKTTYTQQRRIDGAGGGNIASGWDRIGDKKYA
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctttcgacgcctacattcagatcgacaacattccaggcgaagcactggacaagcaa
tacagcaaatggattgaagtgcttggctacgatttcggcgtcagccaaagcacatctgcc
actgcaagttctactggcggagccacttccggccgtacctctgtcaccaacttcactttc
accaaatacctcgacagtgccagttgcaaactgatggaagccagttgcaccgggcagcac
ctcaaggaagtgaaactggcactctgccgcgcgggtggtgacaaactcaagtactacgaa
attatcctcgaggaagtgatcatcgccgagtattcgcagagcgtggacaccggcgtaccg
cttgaagtagtgcagctcaactacggccggatcaagaccacctatacccagcagcggcgc
attgatggcgccggtggcggcaatatcgccagcggctgggaccggatcggcgacaaaaaa
tacgcgtga

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