KEGG   Pseudomonas putida DLL-E4: DW66_4995
Entry
DW66_4995         CDS       T03439                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
ppud  Pseudomonas putida DLL-E4
Pathway
ppud03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DW66_4995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppud03019]
    DW66_4995
Messenger RNA biogenesis [BR:ppud03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DW66_4995
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22
Other DBs
NCBI-ProteinID: AHZ79492
UniProt: A0A059V2A0
LinkDB
Position
complement(5497269..5498600)
AA seq 443 aa
MNFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVL
QRLALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLSTYAVYGGVSINPQMMR
LRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKR
QTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATATSVKQWLVPVDKKRKVDLFCHLLR
KQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREIQVLVA
TDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAAIE
VLTRQTLPRHEEPDFIPDHRVPMTDASGQVIKKPKKPKKPKENSAKRGLGRWMDSAESGS
AEPAVKAVRKVPSFNGGARKRKP
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaatttcgccaaactcggcctgatcgaaccgctgctgcgcaccctgcagcaactggac
tacaccaccccgaccccggtgcaggccaaggccatccccgctgtgctggccggccgcgac
ctgatggccgcggcccagaccggcaccggcaagaccgcgggctttgccctgcctgtgctg
cagcgcctggcgctggaaggcgaaaaggtggccagcaactcgatccgcgcgctggtgctg
gtgcccactcgtgagttggccgagcaggtgcacaacaatgtgcgcgagtatgccgagaac
ctgccgctgagcacctacgcggtgtatggcggggtcagcatcaacccgcagatgatgcgc
ctgcgccgtggcgtcgacctgctggtggccaccccggggcgcttgctcgacctgttccgg
cagaacgccgtgaagttcaaccaggtgcagaccctggtgctggacgaagccgaccgcatg
ctcgacctgggctttgccgaagagctgcagtcggtgtacgccgcgctgccacgcaagcgc
cagacgttgctgttctccgccactttttccgaccagatccgcatgctggcggggctagcc
ctgaacgacccgctgagcatcgaagtcagcccgcgcaatgccacggccaccagcgtcaag
cagtggctggtgcctgtggataaaaaacgcaaggtcgacctgttctgccacctgctgcgc
aagcagcgctggaagcaggtgctggtgttcgccaagacccgtaatggcgtcgatcaactg
gtggagcgcttgctggccgagggtgtgaatgccgacggtatccacggtgaccgcccgcag
gccactcgccagcgcgcgctggacagcttcaaggcccgcgaaatccaggtgctggtggcg
accgatgtggcggcccgcggcctggatatcgatgacttgccgctggtggtcaaccttgac
ctgccgatcgttgctgaggattacgtgcaccgcatcgggcgtaccgggcgggcgggcaac
aagggcgaggctatctcgctggtgtgtgccgatgaagtgcagctgctggcggcgatcgaa
gtgctgacgcggcagaccctgccgcgtcatgaagagccggacttcatccctgaccaccgg
gtgccgatgaccgacgccagtggccaggtgatcaagaagccgaagaagcccaagaagccg
aaggaaaacagcgccaagcgcggcttggggcgctggatggacagcgctgaatcaggcagt
gcggagccggcggtgaaggcagtgcgcaaggtgccgagcttcaatggtggggcgcgcaag
cgtaagccgtag

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