Pseudomonas putida HB3267: B479_21725
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Entry
B479_21725 CDS
T02389
Name
(GenBank) diguanylate cyclase/phosphodiesterase
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ppuh
Pseudomonas putida HB3267
Pathway
ppuh02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
B479_21725
Enzymes [BR:
ppuh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
B479_21725
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
FtsL
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AGA75234
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All DBs
Position
4781140..4783194
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AA seq
684 aa
AA seq
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MKLELRNSLSVKLLRVVLLSALAVGVVLSCAQIVYDTYKTRQAVNSDAQRILDMFRDPST
QAVYSLDREMGMQVIEGLFQDESVRMASIGHPNETMLAEKSRPLQDMSMRWLTDLILGQE
RTYSTQLVGRGPYSEYYGDLSITLDTSSYGEDFLINAVIIFISGVLRALAMGLVLYLVYH
WLLTKPLSKIIEHLTQINPDRPSQHQLPLLKGHEKNELGLWVNTANQLLASIERNTHLRH
EAENSLQRMAQYDFLTGLPNRQQLQQQLDKILVDGGRLQHRVAVLCVGLDDFKGINEQFS
YQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELAQSILDDLEVP
FDLDHHQQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNRYQFYIASVDSEM
RRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMVPPDQFIPLA
EQNGSIIGIGEWVLDQACRQLREWHDMGFSDLRMAVNLSTVQLHHNELPRVVNNLLQAYR
LPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIK
IDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQGCHEGQGYHY
SKPLSARELTNFLKQAQRNQVSMF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaattgcggaacagcttgtcggtcaagttgctcagggtcgtgctgctgtcg
gcgctagcggtcggtgtcgtgctcagctgtgcgcaaatcgtctacgacacctacaagacc
cgccaagccgtgaacagcgatgcccaacgcatcctcgacatgttccgcgacccctcgacc
caggcggtatatagcctcgaccgcgaaatgggcatgcaggtgattgaaggcctgttccag
gatgaatcggtacgcatggcctccattggccaccccaacgaaaccatgctcgcagaaaag
tcccgcccgctgcaggacatgtccatgcgctggctgaccgacctgatcctcggccaggaa
cgtacctacagcacgcaactggtcggccgcggcccctacagcgaatactacggcgacctg
agcatcaccctcgacacctcgtcctacggcgaagatttcctgatcaacgccgtgatcatc
ttcatttccggcgtgctgcgggccctggccatgggcctggtgctgtacctggtctaccac
tggctgctgaccaaaccgctgtcgaagatcatcgagcacctcacccagatcaaccccgac
cgccccagccagcatcagctaccgctgctcaagggccacgagaagaacgagctgggcctg
tgggtaaataccgccaaccagctgctggcctcgatcgagcgcaacacccatctgcgtcac
gaggcggaaaacagcctgcaacgcatggcccagtacgacttcctcaccggcctgcccaac
cgccagcaactgcagcagcaactggacaagatcctcgtcgacggtggccgcctgcaacac
cgcgtggcggtactgtgcgtaggcctggacgacttcaagggcatcaacgagcagttcagc
taccaggtcggcgaccagttgctgctggccctggccgaccgcctgcgcgcccacagcggc
cgactgggcgccctggcacgcctgggcggtgaccagttcgccctggtgcaggccaatatc
gagcagccctacgaggccgccgaactggcgcagagtatcctcgacgacctggaagtgccg
ttcgacctcgaccaccaccagcagatccgcctgcgcgccaccatcggcatcaccctgttc
ccggaagacggcgacagcaccgagaagctgctgcagaaagccgaacagaccatgaccttg
gccaaggcccgttcacgcaaccgctaccagttctacatcgccagcgtcgacagcgagatg
cgccgccgtcgcgaactggaaaaggacctgcgcgaagccctgccacgcaaccagctgtac
ctggtgtatcagccacagatcagctaccgcgaccaccgcgtggtcggtgtcgaagcactg
ctgcgctggcaacatccggagctgggcatggtgcccccggaccagttcatccccctggcc
gaacagaacggcagcatcatcggcatcggcgaatgggtgctcgaccaggcgtgccggcaa
ttgcgcgaatggcacgacatgggcttcagcgacctgcgcatggcggtcaacctgtccacc
gtacagctgcaccacaacgagctgccgcgggtggtcaacaacctgctgcaggcttaccgc
ctgccaccacgcagcctggaactggaagtcaccgaaaccggcctgatggaagacatcagc
accgccgcccagcacctgctgagcctgcgccgctccggagcactgattgccatcgacgac
ttcggcaccggctactcgtcgctcagctacttgaaatcgctgccgctggacaagatcaag
atcgacaagagcttcgtccaggacctgctggacgacgatgacgacgccaccatcgtccgc
gccatcatccagctgggcaagagcctgggaatgcaggtaatcgccgaaggcgtggaaacc
gccgaacaagaaacctacatcgtcgcccagggctgccacgagggccagggctaccactac
agcaagccgctgtcggcccgtgagctgaccaacttcctcaagcaggcacagcgaaaccag
gtttcgatgttctga
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