Pseudomonas putida HB3267: B479_26205
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Entry
B479_26205 CDS
T02389
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
ppuh
Pseudomonas putida HB3267
Brite
KEGG Orthology (KO) [BR:
ppuh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppuh03016
]
B479_26205 (rph)
Enzymes [BR:
ppuh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
B479_26205 (rph)
Transfer RNA biogenesis [BR:
ppuh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B479_26205 (rph)
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AGA76128
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All DBs
Position
complement(5785755..5786477)
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AA seq
240 aa
AA seq
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MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWL
TAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVI
QADGGTRTASITGAMVALCDALAVIKKRGGLKAGNPLKHMIAAVSVGMYQGEAVLDLDYL
EDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMSEIFELQQAALAD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtccaagtggtcgcgccgccgatcagctccgctcgatccgcattacccgcaac
tacaccaagcacgccgaagggtcggtactggtcgagttcggtgacaccaaggtcatctgc
acggtcagcgtggaaaacggtgtgccgcgctttctcaaaggccagggccaaggctggctg
actgccgagtacggcatgctgccgcgctccaccggcgagcgtaaccagcgtgaagccagc
cgtggcaagcagggtggccgcaccctggaaatccagcgtctgatcggccgttcgctgcgc
gccgcgctggacatgagcaagctcggtgatatcaccctgtacgtcgactgcgacgtgatc
caggccgatggtggcacccgtaccgcgtccatcaccggtgcaatggtcgctctgtgcgat
gccctggcggtgatcaagaagcgcggtggcctgaaagccggcaacccgctcaagcacatg
atcgccgcagtgtcggtgggcatgtatcagggcgaagcggtgctcgacctggactacctg
gaagactccgccgccgaaaccgacctgaacgtggtcatgaccagcgccggtggtttcatc
gaagtgcagggtactgctgaaggtgcgccgttccagcctgaagacttcaacgccatgctc
gccctggcgcagaagggcatgagcgagatcttcgaactgcagcaggcggcactggccgac
tga
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