KEGG   Pandoraea pulmonicola: RO07_09455
Entry
RO07_09455        CDS       T03553                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ppul  Pandoraea pulmonicola
Pathway
ppul00300  Lysine biosynthesis
ppul00470  D-Amino acid metabolism
ppul01100  Metabolic pathways
ppul01110  Biosynthesis of secondary metabolites
ppul01120  Microbial metabolism in diverse environments
ppul01230  Biosynthesis of amino acids
Module
ppul_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppul00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RO07_09455
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RO07_09455
Enzymes [BR:ppul01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RO07_09455
SSDB
Motif
Pfam: DAP_epimerase SPO11_like
Other DBs
NCBI-ProteinID: AJC23196
LinkDB
Position
241561..242412
AA seq 283 aa
MKLKFTKMQGAGNDFVVIDGISQTIDFTPGQWRALADRHFGVGADQLLLVERSALPGVDF
RYRIFNADGGEVEHCGNGARCFVKFVRDTGLTDKRSVRVEVQQGVITLTMRDDGQVSVDM
GAPILTPSDVPFDASGLQGRTEGGDTLWPLDVAGRTTWISVVSMGNPHAVQVVDDVDAAP
VETDGPLIERHARFPRRVNAGFLQVVDKHRGRLRVYERGAGETLACGTGACAAAVAGIRR
GLLTSPVALETHGGTLTIEWDGATGPVIMTGPAATVFEGTIEI
NT seq 852 nt   +upstreamnt  +downstreamnt
atgaagctcaaattcaccaagatgcaaggcgccgggaacgacttcgtcgtgatcgacggc
atctcgcagaccatcgatttcacgccggggcagtggcgtgcgctcgccgaccgccatttt
ggcgtgggcgccgaccagctcctgctcgtcgagcgctcggccctgccgggcgtggacttc
cgctaccggatcttcaacgccgatggcggcgaggtggagcattgcggcaacggcgcgcgc
tgcttcgtgaagttcgtgcgcgacaccgggcttaccgacaagcgctcggtgcgcgtggag
gtgcaacagggcgtgatcacgctcaccatgcgcgacgatggtcaggtcagtgtggatatg
ggcgccccgattctcacgccgtcggacgtgccgttcgacgcgagcggcctgcaaggccgt
acggaaggcggcgacacgctctggccgctcgatgtggcgggccgcacgacgtggatttcc
gtggtttcgatgggcaacccgcatgccgtgcaggtggtggacgacgtcgatgccgcgccg
gtcgagaccgacggcccgctgatcgagcgccatgcgcgcttcccgcgtcgcgtgaacgcc
ggtttcctgcaggtggtggacaagcatcgggggcggttgcgcgtgtacgagcgtggcgcg
ggcgagacgctcgcctgcggcaccggcgcctgcgctgcagcggtggcgggcatccgccgc
ggcttgctgacctcgcccgtggcgctcgagacgcatggcggcacgctgaccatcgagtgg
gacggcgccaccggtccggtgatcatgaccgggcctgccgccacggtcttcgagggcacc
atcgagatctga

DBGET integrated database retrieval system