Pandoraea pulmonicola: RO07_09455
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Entry
RO07_09455 CDS
T03553
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00300
Lysine biosynthesis
ppul00470
D-Amino acid metabolism
ppul01100
Metabolic pathways
ppul01110
Biosynthesis of secondary metabolites
ppul01120
Microbial metabolism in diverse environments
ppul01230
Biosynthesis of amino acids
Module
ppul_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RO07_09455
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RO07_09455
Enzymes [BR:
ppul01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RO07_09455
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Gene cluster
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Motif
Pfam:
DAP_epimerase
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
AJC23196
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Position
241561..242412
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AA seq
283 aa
AA seq
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MKLKFTKMQGAGNDFVVIDGISQTIDFTPGQWRALADRHFGVGADQLLLVERSALPGVDF
RYRIFNADGGEVEHCGNGARCFVKFVRDTGLTDKRSVRVEVQQGVITLTMRDDGQVSVDM
GAPILTPSDVPFDASGLQGRTEGGDTLWPLDVAGRTTWISVVSMGNPHAVQVVDDVDAAP
VETDGPLIERHARFPRRVNAGFLQVVDKHRGRLRVYERGAGETLACGTGACAAAVAGIRR
GLLTSPVALETHGGTLTIEWDGATGPVIMTGPAATVFEGTIEI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaattcaccaagatgcaaggcgccgggaacgacttcgtcgtgatcgacggc
atctcgcagaccatcgatttcacgccggggcagtggcgtgcgctcgccgaccgccatttt
ggcgtgggcgccgaccagctcctgctcgtcgagcgctcggccctgccgggcgtggacttc
cgctaccggatcttcaacgccgatggcggcgaggtggagcattgcggcaacggcgcgcgc
tgcttcgtgaagttcgtgcgcgacaccgggcttaccgacaagcgctcggtgcgcgtggag
gtgcaacagggcgtgatcacgctcaccatgcgcgacgatggtcaggtcagtgtggatatg
ggcgccccgattctcacgccgtcggacgtgccgttcgacgcgagcggcctgcaaggccgt
acggaaggcggcgacacgctctggccgctcgatgtggcgggccgcacgacgtggatttcc
gtggtttcgatgggcaacccgcatgccgtgcaggtggtggacgacgtcgatgccgcgccg
gtcgagaccgacggcccgctgatcgagcgccatgcgcgcttcccgcgtcgcgtgaacgcc
ggtttcctgcaggtggtggacaagcatcgggggcggttgcgcgtgtacgagcgtggcgcg
ggcgagacgctcgcctgcggcaccggcgcctgcgctgcagcggtggcgggcatccgccgc
ggcttgctgacctcgcccgtggcgctcgagacgcatggcggcacgctgaccatcgagtgg
gacggcgccaccggtccggtgatcatgaccgggcctgccgccacggtcttcgagggcacc
atcgagatctga
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