Pseudomonas putida NBRC 14164: PP4_05160
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Entry
PP4_05160 CDS
T02707
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PP4_05160 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_05160 (uvrA)
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP4_05160 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PP4_05160 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
AAA_23
BCA_ABC_TP_C
AAA_22
RsgA_GTPase
AAA_33
Viral_helicase1
nSTAND3
DnaJ_CXXCXGXG
APS_kinase
cobW
Zn-ribbon_8
AAA_21
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAN52369
LinkDB
All DBs
Position
complement(592059..594893)
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDIPLEAQTISQMVDLVLERPEGSKLMLLAPVVRERKGEHLAVFDELRAQGFVRARVN
GKLYELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
EGEEMIFSARFACPVCGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLVNAELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFGELSAEHQKVILQGSGKQTVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGEASNYFGELTLTGRRGEIASKILKEICERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLATLNHLRDLGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGTPQEVMDHPDSLTGKYLSGRKKIVVP
AKRTPRNKKLQLKLKGARGNNLQNVDLEVPIGLLTCVTGVSGSGKSTLINNTLFPLAATA
LNGASTLEAAPHSSMDGLQHLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKNIHEVLEMTIEDAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIACGTPEELSGMKQSYTGHYLKPLLERDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagatcctgattcgtggggcacgtacccacaacctgaagaacatcgacctgacc
ctgccccgggacaagctgatcgtgatcaccggcctgtccggttccggcaagtcgtccctg
gcgttcgataccttgtacgccgaaggccagcgccgctacgtggagtcgctgtcggcctac
gcccggcagttcctgtcgatgatggaaaagcccgacgtcgacaccatcgaaggcctgtcg
ccggccatttccatcgagcagaaatcgacctcgcacaacccacgctccacggttggcacc
atcaccgaaatctacgactacctgcgcctgctgtatgcccgcgtcggcacccctcgttgc
ccggaccacgatatcccgctggaggcgcaaacgatcagccagatggtcgacctggtgctg
gagcgcccggaaggcagcaagctgatgctgctggcaccggtggtgcgcgagcgcaagggt
gagcacctggcggtgttcgacgagctgcgcgcacagggcttcgtccgcgcacgggtaaac
ggcaagctttacgagcttgatgaactgccgaagctggacaagcagaagaagcacagcatc
gatgtggtagtggaccgcttcaaggtccgcgccgacctgcagcagcgcctggccgaatcg
ttcgagaccgcactcaagctggctgacggcatcgccctggtagcgccaatggacgacgaa
gaaggcgaagagatgattttctccgcccgcttcgcctgcccggtctgcggccatgccatc
agcgagctggaaccgaagctcttctccttcaacaacccggctggcgcctgcccgacctgt
gatggcctgggggtcaaacagttcttcgacaccaagcgcctggtcaatgccgaactcacc
ttggccgaaggcgcgatccgtggctgggaccggcgcaacgtgtactatttccagatgctt
ggctcgctggccgcgcattacggcttcagcctggaagaaccgttcggcgagctgtcggcc
gagcaccagaaggtcatcctgcaaggcagtggcaagcagactgtcgacttcaagtacctc
aacgaccgtggcgacatcgtcaagcgctcgcacccgttcgaaggcatcgtgccaaacctt
gagcgccgctaccgcgagaccgaatcggccactgtgcgtgaagagctggcgaagttcctc
ggcacccagccctgcccggattgccgcggcacccgcctgcgccgcgaggcgcggcatgta
tgggttggcgaaaagaccctgccggcggtgaccaacctgccgatcggtgaagccagcaac
tatttcggcgagctgaccctcaccggccgccgcggcgagattgcctcaaaaattctcaag
gaaatttgcgaacgcttgcagttcctggtcaacgtcggcctcgactacctcaccctcgac
cgcagcgccgataccctgtccggtggcgaagcgcagcgtatccgcctggccagccagatc
ggcgccggcctggtcggggtgatgtacatcctcgatgaaccgtccatcggccttcatcaa
cgcgacaacgaccgcctgctggccaccctcaaccacctgcgcgacctgggtaacacggtg
attgtggtggagcatgacgaggacgccattcgcctggccgactacgtggtcgacattggc
ccgggtgccggggtgcacggcggccagatcgtcgccgagggcacgccgcaggaggtcatg
gaccaccctgactcgctgaccggcaagtacctgtccgggcgcaagaagattgtcgtgcca
gccaagcgcacaccgcgcaacaagaagctgcagctaaagctcaaaggcgcgcgcggcaac
aacctgcagaacgtcgacctggaagtcccgatcgggctgctgacctgtgtaaccggggta
tccggctcgggcaagtcgacgctgatcaacaacaccctgttcccgctggcagccactgcc
ctcaatggtgcaagcaccctggaggcggccccgcacagcagcatggacggcttgcagcac
ctggacaaggtggtggatatcgaccagagcccgatcggccgcaccccgcgctcgaacccg
gcgacctacaccggcatcttcacgccgatccgcgagctgttctccggcgtgccggaatcg
cgctcacgcggctacggccctgggcgcttctcgttcaacgtcaagggcggccgctgcgag
gcttgccagggggacggcctgatcaaggtggagatgcacttcctgccagacatctacgtg
ccgtgcgacgtgtgcaagagcaagcgctacaaccgcgaaaccctggagatcaagtacaag
ggcaagaacatccacgaggtgctggaaatgaccatcgaggatgcccgcgagttcttcgac
gcggtaccggcgctggcgcgcaagctgcaaacgctgatggatgtggggctttcgtacatc
aagctggggcagtcggcgaccacactgtctggcggtgaagcgcagcgggtaaagctgtca
cgcgagctatccaagcgcgataccggcaagaccctgtacatcctcgatgaaccgaccaca
ggcctgcactttgctgatatccagcagctgctggacgtccttcatcgcctgcgcgaccac
ggcaacaccgtggtggtgatcgagcacaacctggatgtgatcaagaccgccgactggttg
gtagacctggggccggagggtggctccaaaggtggccagatcattgcctgcggtacacct
gaagagctgagcgggatgaaacaatcgtataccgggcattacctgaaaccgctgctggag
cgggatcgggcctga
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