Pseudomonas putida H8234: L483_22555
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Entry
L483_22555 CDS
T02706
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pput
Pseudomonas putida H8234
Brite
KEGG Orthology (KO) [BR:
pput00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pput03016
]
L483_22555
Enzymes [BR:
pput01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
L483_22555
Transfer RNA biogenesis [BR:
pput03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
L483_22555
Prokaryotic type
L483_22555
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
NAD_binding_10
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AGN79733
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All DBs
Position
4705004..4705963
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AA seq
319 aa
AA seq
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MDLLFLGTCAGVPTKARNVSATAVIEASGSGWYLVDCGEGTQHQLLRTPLSIRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRTQPLELILPAALHDWVRQGLAASDTFLPFELRLLAVE
DLVEWRNDTLQVTTVQLSHRVPSVGFIFTELNPEPRLDIPRLEAEGIPRGPLWGELARGL
TVQHGEQLLNGNDYLRPSRPPRRVIVCGDNDTPELLADAAQGADVLVHEATFTQAVVERT
GVTFGHSTAAAVARFAEAAGVRNLVLTHFSARYQSDPRRSPNIDNVRDEALVHYSGHLTL
AQDLQRYHLGRDGCLELTG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgttcctcggcacttgcgccggggtgcccaccaaggcacgcaatgtcagc
gccacggcggtgatcgaagccagtggcagcggctggtacctggtcgactgcggcgaaggc
acccagcaccagctgctgcgcaccccgctgtcgatccgcgacctgcgcgccattttcatc
acccacgtgcacggcgatcattgcttcggcctgcccggcctgctggccagtgccggcatg
agcgggcgtacgcagccgctggaactgatcctgcccgccgcgctgcatgactgggtacgc
cagggcctggccgccagcgataccttcctgccgttcgaactgcgcctgctggccgtggaa
gatctggtcgaatggcgaaacgatactctgcaggtaaccaccgttcagctgtcacaccgc
gttccgagcgtcgggttcatattcaccgaactcaaccccgaaccgcgcctggacatcccc
cgcctggaagccgaaggcataccgcgtggcccgctgtggggcgagctggccaggggtttg
acggtgcagcatggcgagcagttgctgaatggcaacgactacctgcgcccttcccggcca
ccgcggcgggtgatcgtgtgcggcgacaacgatacccccgagctgctggccgacgctgcc
caaggcgcggatgtgctggtgcacgaagccacgttcacccaggccgtggtcgaacgcacc
ggggtcaccttcggccatagtactgcagcggcggtggcgcgctttgccgaagcggcgggc
gtgcgcaacctggtgctgacgcatttcagcgcccgctaccagagcgacccaaggcgcagc
ccgaatatcgacaacgtgcgtgacgaagccctcgtccactacagcgggcacctgaccctg
gcgcaggacctgcagcgctatcaccttggccgggatggctgtcttgagctgaccggatga
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