Pseudomonas putida W619: PputW619_0004
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Entry
PputW619_0004 CDS
T00675
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ppw
Pseudomonas putida W619
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppw03032
]
PputW619_0004
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_0004
Enzymes [BR:
ppw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PputW619_0004
DNA replication proteins [BR:
ppw03032
]
Prokaryotic type
DNA Topoisomerases
PputW619_0004
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PputW619_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ACA70510
UniProt:
B1J3Y5
LinkDB
All DBs
Position
4189..6609
Genome browser
AA seq
806 aa
AA seq
DB search
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ITVIIHTDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGESETTGTHIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQ
VFHFNVQREDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIE
QEGLAKKNKVSTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFA
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGI
GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVK
KGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEVLVNEFRGVMKTLKRLS
RLYPEELTEHFIYLPEVTLEQLGDHAVMENWLAKLQERLSNSQKSGLMYKATLREDKERN
VWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGSKLASLLGEGAYVQRGERRKAIVE
FKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFN
TLMGDAVEPRRDFIESNALSVSNLDF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaatcaaacgtacgactcttcaagcatcaaggtgctgaaaggtttggatgcc
gtgcgcaagcgtcccggcatgtacattggcgacaccgatgacggtagcggcctgcaccac
atggtcttcgaagtggtcgacaactcgatcgacgaagccctcgccgggcactgcgatgac
atcaccgtcattatccacacggatgaatccatcagtgtgcgcgacaacggtcgcggcatt
ccggtcgacgtgcataaagaagaaggcgtttctgcggctgaggtcatcatgaccgtactg
cacgcgggcggtaaatttgatgataactcctacaaagtttccggcggtctgcacggtgta
ggtgtttcggtagtaaacgccctttcggaaaagctggtgcttaccgttcgccgtagcggc
aagatctgggagcagacctacgttcatggtgttccacaggcgccgatggccgttgtgggc
gaaagcgaaaccaccggtacccatattcatttcaagccttcggctgagaccttcaagaat
attcacttcagctgggacatcctggccaagcgtattcgtgaactgtccttcctgaactct
ggcgtcggcattctgctgaaagacgagcgctcgggcaaagaagagttcttcaaatatgaa
ggcggcctgcgtgcattcgttgaatacctgaacaccaacaagactccggtcaactcccag
gtgttccatttcaacgttcagcgtgaagatggcgtgggtgttgaagttgccctgcagtgg
aacgacagcttcaacgaaaacctgctgtgcttcaccaacaacattccgcagcgcgatggc
ggtacccacctggttggtttccgctcttcgctgacccgtagcctgaacagctacatcgag
caggaaggcctggccaagaagaacaaggtttccaccaccggtgacgatgctcgtgaaggc
ctgaccgcgatcatttcggtcaaggtgccggatccgaagttcagttcgcagaccaaggac
aagctggtttcctcggaggtgaaaaccgccgtggaacaggagatgaacaagtacttcgcc
gacttcctgttggaaaaccccaacgaagccaaagcggtagtcggcaagatgatcgacgct
gcccgtgcccgtgaagcggcgcgcaaagcgcgtgaaatgactcgccgtaaaggcgcgcta
gatatcgcgggcttgccgggcaaactggcggactgccaggagaaggaccctgctctttcc
gaactgtacctggtggagggtgactccgcaggtggctcggccaagcaaggtcgtaaccgt
cgtacccaggcgatcctgccgctgaagggcaagattctcaacgtcgagaaagcacgtttc
gacaagatgatctcttcccaggaagtgggcacactgatcaccgcgctgggctgtggcatc
ggccgcgaagagtacaacatcgacaagctgcgctatcacaacatcatcatcatgaccgat
gctgacgttgatggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagctg
ccagagctggtcgagcgtggctacatctacattgcccagccaccgctgtacaaggtgaag
aaaggcaaacaggagcagtacatcaaggacgacgaggccatggaagaatacatgacccag
tcggccctcgaagatgccagcctgcacctggatgagtctgcgccagccgtttccggcgtt
cagctggaggttttggtcaacgagttccgcggtgtgatgaagaccctcaagcgcttgtct
cgcttgtacccggaagagttgaccgagcacttcatctacctgccggaagttaccctggag
caattgggcgaccatgccgtcatggagaactggttggccaaactgcaggagcgcctgagc
aacagccagaagtctggcctgatgtacaaggccactctgcgcgaggacaaagagcgcaat
gtgtggctgcctgaagtggaaatcacctcgcacggcctggccagctacatcaccttcaac
cgcgatttcttcggcagcaacgactatcgcacggtggtcaacattggctccaagttggcg
agcctgctgggcgaaggtgcttacgtacagcgtggtgaacgtcgcaaggcgatcgtcgag
ttcaaggaaggcctggattggctgatgaacgagaccaccaagcgtcacaccatccagcga
tacaaagggctgggtgagatgaacccggaccagttgtgggaaaccaccatggacccaact
gtacgacgcatgctcaaggtcaccatcgaagacgccattgccgccgatcagatcttcaac
accttgatgggggatgcggttgaacctcgccgtgactttatcgaaagcaacgcgctgtcg
gtttctaacctggacttctga
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