Pseudomonas putida DOT-T1E: T1E_4021
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Entry
T1E_4021 CDS
T02181
Name
(GenBank) RNA-binding S4 domain-containing protein
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
ppx
Pseudomonas putida DOT-T1E
Brite
KEGG Orthology (KO) [BR:
ppx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppx03009
]
T1E_4021
Enzymes [BR:
ppx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
T1E_4021
Ribosome biogenesis [BR:
ppx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
T1E_4021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AFO49851
UniProt:
I7C9K7
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All DBs
Position
4392306..4393121
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AA seq
271 aa
AA seq
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MPRYVSKMAHLTQIPIIYRLQAGTMEAFPCLANCPMSEPVRLSKRLIEQLGCSRREAEQY
IEGGWVTVDGVVVEQPQFKVEQQRVELLPGARAETLEPVTLLLNQPAGMDSEDARASMNM
GSLSEAHREGVRALHGHFARQACVAPLERGASGLQVFTQDWRVSRKIEADLRRLEQEFII
EVRGETTPQALERLARGAMRNDRELPKAKASWQNETHLRMVLKNPQPGQISELCAYLRLE
LLGMRRIRLGGVSMGKLPLGQWRYLATSERF
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgctatgtgtccaaaatggcgcatctgacacagattcccatcatctaccgcttg
caggcaggtacaatggaggcctttccctgccttgcgaattgccccatgtccgaacccgtc
cgcctgtccaaacgcctcatcgagcagctcggctgctcccgccgcgaggccgagcagtac
attgaaggaggctgggtaacggtcgatggcgtggtggtcgagcagccgcagttcaaggtt
gagcagcagcgcgtcgaactgctgccgggcgcccgtgccgaaaccctggagccagtgacc
ctgctgctgaaccagccagccggcatggacagtgaggacgcccgcgccagcatgaacatg
ggcagccttagcgaggcccaccgcgaaggcgtgcgcgccctgcacgggcattttgcccgg
caggcctgcgtggcaccgctggagcgtggcgccagcggcctgcaggtgtttacccaggac
tggcgggtatcccgcaagatcgaggccgacctgcgtcgcctggagcaagagttcatcatt
gaagtgcgcggcgaaaccaccccccaggcgctggaacgcctggcgcgtggggccatgcgc
aatgaccgcgagttgcccaaggccaaggccagctggcagaacgagacacacctgcgcatg
gtgttgaaaaacccacaaccagggcagatttccgagctatgcgcctacctgcgcctggag
cttttaggcatgcgacgcattcgcctgggtggtgtgtcgatgggcaagctgcccttgggc
caatggcgttacctggctacctccgaacgtttctaa
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