Poecilia reticulata (guppy): 103461037
Help
Entry
103461037 CDS
T05149
Name
(RefSeq) LOW QUALITY PROTEIN: ranBP2-like and GRIP domain-containing protein 4
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
pret
Poecilia reticulata (guppy)
Pathway
pret03013
Nucleocytoplasmic transport
pret03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103461037
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103461037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pret03019
]
103461037
03110 Chaperones and folding catalysts [BR:
pret03110
]
103461037
04121 Ubiquitin system [BR:
pret04121
]
103461037
Messenger RNA biogenesis [BR:
pret03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103461037
Chaperones and folding catalysts [BR:
pret03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
103461037
Ubiquitin system [BR:
pret04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103461037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
zf-RanBP
WH1
TPR_16
TPR_2
TPR_1
TPR_7
TPR_8
TPR_14
Motif
Other DBs
NCBI-GeneID:
103461037
NCBI-ProteinID:
XP_017157986
LinkDB
All DBs
Position
LG2:36615556..36644286
Genome browser
AA seq
3113 aa
AA seq
DB search
MRRSKAEVDRYVSSVQSSSPSLKEKPVRGFLFAKLYFEAKEYELAKRHVSEYLKVQERDP
KAHKFLGQLYEREGEINKAIGCYKRSVDLNPVQRDLVLKVAELFVGKGDCDSKAEFWVEK
AAKLMPGNPEVFNLKERLLSRQGQQGWNQLFDLLQAELAARPADALVNVKLVQLFCQDGR
LDEAVKHCLATEKKGLLRNSFDWYNVQLKTLQEYLDQPSVSNNEKMCRRLQREVLLAHCS
LLRIRLSESGVQPSIDAFRSFDQAMQALSGVAARFADELLEVFVEMRAHLYLHAATLLLK
MAQDRQHTWRAVIDLAALCYLLAYQAPRPKTKVTKKDQSAPQLLELLASDRQSQAGHMLL
NLSANTFTLIREVVEAFGNRSGQESVFELLWGPRASLASSFIANDDIHSLSSLGPELSNL
VKWDSGSILLHGGELQHLSWLGLQWMLLDQRPPMRDWLQQLFPRLMLETSKLDTNAPESI
CLLDLEAFLCGVVFCSHCQLQDTARINRSLSPRQQQLFEPRCLPLPLLRLLSTQRQREWW
DAVYSLIHKRALPGTSAKLRMVVQHGLNTLRAGEKHGLQPALMIHLAQSLSQTGDGMNSY
YDQKEYVGRSVHYWRVVMPLLEKIKIRRSIPEPLDPLFIHFASKDIQIPAVKGYEDEAKI
VYAVLLDIEGRTEEAIATLESINNMSSIWHLAQIYQRLAEEASNGVEETQDRCLTFLRKF
RNYLSKIYNANADDIERLPVSMEEVVDLLNDVNQQLGETQEDMEEEEEQEVNLRRGPTHS
SPARLTETSATVSHIKFASPSPSKSIVSPSKRLISPKTPPHWIEDQKSLLQMLCQQVEAL
KNEVHDLKHNASVNSGSPRHKMHGDAYRAESLQEPFTPVQSYHGTPLTVATTAPPVYYNQ
SPAYNSQYLLRTAANVTPTKGPMYGVNRMPPQQHMYAYQPPTHTPPLQTGPSCIYPPQEQ
VFGSPLRFESQATGLLSPYSEEYYGQNVAQQTTNPTLPEPGYFTKPSVVPVQPPKGVEGK
PVDFGKLSFSQQAAADVPRVSNFGAGAVGPATTSPAFKFNCFPKSSERDLSFCSPQTKQS
ESLLGLLTSDLPPKPDSFPEKPPAHEQPPGHQNIFTFGNKNISSFSFADSTPNVPAGGYF
GKPEQPFKFGEATTFGIGKTSELEKAAESDESTHVEEDEDGPHFEPIVPLPDKVDVKTGE
EEEEEMFCNRAKLYRFDTETKEWKERGIGNIKILKHNTKGKVRLLMRREQVLKICANHYI
TADMLLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEAALFKAKFEEAQQVTSKS
PEKQQEKKGETPKDLGLLASRFALKEGEWDCAVCDVRNKATAAQCAACNTPNPQSSSKPE
LQATTEVKTSPFSFKFGTDSSKPSGSTSTFTGFGAFGTSVPSSFTFGMSSSKPTDKLAGP
FGFSFGSQIPTKPEQWDCGKCSAKNEASTDSCASCKTPKTAVKTDEAAQTAPAPEAPAAQ
SFVSAVDAGFAARFSKKPGQWDCDVCEVRNEASANKCVSCQTPNPASKSSTVAPAAQSST
VAPAAQSTTVAPAAQSTTVAPAAXXXXXXXXXXTVAPAAQSTTVAPAAQSTTVAPAAPTA
PAASGFLADFAKKDGQWDCNVCLVRNEGSAAQCVSCQSPNPNPSLEAMFGKKEGEWDCEA
CLVRNKASSNECVACKTSNPNAKSTVTSAASASSFSFNFGTTSSSNQAAGPAFPFGSNGA
FQFGQNKDKASASAFKFEAPPAVPATTTSSGFSFSMPIPAGGFKFGVQDSATDSTSSNNQ
TSTGSASSILKNMADKHKEKENVSTPSVDQTEKDQNPLIAGKADTFSFADLAKSSEGTFQ
FGQKDPNFKGFSGAGAQVFASPQTTPTKVEASNELEDDGMYKTEEHDDIQFEPVVQMPDK
VDLVTGEEDEQVLYSQRVKLFRFDSGTSQWKERGVGTLKFLKNGTNGRLRVLMRRDQVLK
VCANHWITTTMNLKPLAGSDKAWIWMANDFSDGDAKLEQLAAKFKTTELAEEFKEKFEEC
QRLLLDIPLQTPHKLMDTGRTAHLIKKAEEMKSGLKDLKSFLTDEKTKIQDDEVQGDITA
ASELSSLGVRPHGETTGPTLEWDNYDLREEALDDTADSLVYTTPVSSSPLRKNLFRFGES
TSGFSFSFQPGISPSKSPAKLNLSRASVGTDEEQDTTQDEERDGQYFEPVVPLPDLVEIS
TGEENELVVFSHRAKLYRYDKEVKQWKERGIGDLKILQSFETKRVRLIMRRDQVLKLCAN
HWLSSAMRLEPMKGAEKAWVWSALDFAEEGDGKVEQLAVRFKMQETANTFKQVFEEAKAA
QEKSELMTPVTPRLSAPSESGPSATSESTTTSLCGQAAIAVLEETTREQTATSPAARSAA
AGSQSPVNPLKTVVSPPKFVFGSDSVQKIFGSPKSESQASTSVSGLTAKDGESSVKPTIP
APAFKMHTGLDFRLFKDNPMAFWTSTSTVQFESPGSPQTEASSSGSDDDSDVEIVFVREP
TAEQAALARELRLPLTFFCYKNEPGYTSDDEPDDEDFESAVRALNGKLYPDAPEAAAAVS
AEEPDCQFVWEKKPTPEEEERAKSLQLPPTFFCGLSATDSDPDSEEPEDFETELRKAQQD
LVAQLNRGEPVSTDPTEPSQASASASGPSTSRAEPADGRPTPDDQLGEKPTDTQSETPSS
SSSPIDLSTKKSPEPESRTDTTAAPDSSSFGFNSLEGFSFADLAKNTDEFAFGSQDANFS
WANAGATVFGAAAPTEAKNSAAEEGSDEEEASNNVDIYFEPIVSLPEVETKSGEEDEEIL
FKERAKLYRWDRDLGQWKERGIGDLKILFHPTKHFYRILMRRDQVLRVCANHTISESMEL
KPMNTSANALVWTATDYSDGEGEVEQLAAKFKTSELAESFRKTFCECQSRIGQTGDDASV
LSRVQEHSRDTNPLVFLRVAADGEPLGSITIELFSHIVPKTAENFRALCTGEKGFGLQNS
VFHRVIPDFMCQGGDITKGDGTGGKSIYGAAFEDENFDVRHTGPGILSMANRGRDTNNSQ
FFITLKKAEHLDFKHVVFGYVRDGMSVVQKMGELGTKGGAPAKKLVITECGQL
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggagtaaggctgaagtggaccgctacgtttcctccgtacagagttcctctcct
tcactcaaagagaagccggtcagaggatttctatttgcaaaactgtactttgaagcaaaa
gaatatgaacttgcaaaacgacatgtatcggagtatctcaaagtgcaggagagggatccc
aaagcacacaaatttctgggacagctctatgaaagagagggagagatcaacaaggcaatt
ggttgctacaagcgctcggtggacctgaacccggtgcagagagacctggtgctgaaagtt
gccgagctgttcgttggtaagggagactgcgacagcaaagcagagttctgggtggaaaaa
gctgcaaagctcatgcctgggaacccagaagtcttcaacttaaaggagcgcctgttgagc
cgtcagggccagcagggctggaaccagctgttcgacctactccaggccgagctggcagcc
cgaccggccgacgctctggtgaatgtaaagttggttcaactattttgccaggacggtcgg
ctggacgaggccgtcaaacattgtctggctactgagaaaaagggcttgctgcgcaacagt
tttgactggtacaacgtgcagctgaaaacgttacaggagtatctggatcagcccagcgtt
tcaaacaatgagaagatgtgtcgacgtctccaaagagaagtgctgctggcgcactgcagc
ctgctgcgaatcagactgtctgagagcggcgtacagccaagcattgacgcattcaggagt
tttgaccaagctatgcaggcgctgagcggcgtcgccgcgcgcttcgccgatgaactcctg
gaggtgtttgtggagatgagggctcacctgtacctgcatgccgccacgctgctgctgaaa
atggctcaggaccggcagcacacctggagagccgtcattgacctggccgcgctctgctac
ctgctggcataccaggctcccagaccaaagactaaagtgaccaaaaaggaccagtcggcg
ccgcagctgctggagctgctggccagcgaccggcagagtcaggcgggacacatgctgctc
aacctgagcgccaacaccttcactctgataagagaggtggtggaggcgtttgggaaccgt
agcggtcaggagtctgtgttcgagctcctctggggtcctcgggcgtccctcgcatcctcg
tttatcgccaacgacgacattcactcgctcagctctttgggtccagagctctccaacctg
gtcaagtgggactctggctccatcttgctgcacggcggggagctgcagcacctgagctgg
ctggggctgcagtggatgctgctggaccagaggccgcccatgcgcgactggctgcagcag
ctgtttcccaggctgatgctggaaacgtccaagctggacaccaacgcgccggagtcgatc
tgcctgctggacctggaggcgtttctatgcggcgtggttttctgcagccactgtcagctt
caggacacggcgaggatcaaccgcagcctgagtccgcggcagcagcagctcttcgagcct
cgctgccttcctcttcctctcctccgcctcctctccacgcagcggcagagggagtggtgg
gacgccgtctacagcctcatccacaaacgagcccttcccggtacgtcggccaaactgcgg
atggttgtgcaacatggcctgaacacgctaagagctggagagaaacacgggctccagccg
gcgctgatgatccacttggctcagagtctgagccagacgggcgatggcatgaactcgtat
tacgaccagaaggagtacgttggccgcagcgtccactactggcgggttgtgatgccgctg
ctggagaaaataaaaatcagacgaagcataccagaaccgctggaccctctcttcatacac
ttcgcctctaaggacattcagattcccgctgtgaaaggttatgaagacgaagcaaaaatc
gtgtacgccgttcttctggacatcgaaggcagaactgaggaggcgatcgcgactttagaa
agcatcaacaacatgtcgtcgatctggcatttagcacagatttatcagcggctggcagag
gaggccagcaacggcgtggaggaaacccaggacaggtgtttaaccttcctgaggaagttc
aggaactacttgtcaaaaatctacaacgccaacgcagacgacatcgaaaggcttcccgtg
tccatggaggaagtggtggatctcctgaacgacgtaaatcagcagcttggcgaaacccag
gaggacatggaagaggaagaggagcaggaagtgaaccttcggcgaggaccgactcactcc
agtccggctcgtctcacagaaaccagcgccaccgtttcgcacatcaagtttgcatctccg
tctccgagtaaaagcatcgtttctccttccaaaagactgatttccccaaagacaccacct
cattggattgaagaccagaaaagtctccttcagatgttatgtcagcaagtagaagccctc
aagaatgaggttcatgatctcaaacacaacgcgtccgtgaactccggctcgcctcgccat
aagatgcatggagacgcctacagagccgagagcttgcaggagccgttcaccccggtccag
tcctaccacggaaccccgctaactgttgccaccacagcccctcctgtttattacaaccag
tctcctgcctacaactcccagtatttactgcgaacagcggcaaacgtcacccccaccaag
ggtccaatgtatggggtgaaccgtatgcccccccagcagcacatgtatgcctaccagcca
cccacacacactcctccgctgcagactggcccgtcctgcatctaccctccgcaggaacaa
gtcttcggttcccctcttcggtttgaatctcaagccacaggccttctctctccatacagt
gaagaatattatggccagaacgtcgcccagcagactactaatcccactctgcctgagcct
ggctacttcaccaagccgtctgtcgtccccgttcagccgccgaagggcgtcgaggggaag
cctgtggactttgggaagctttccttcagccagcaggctgcagctgacgtacccagagtg
tcgaattttggcgcaggggcagttggcccggctacaacttcacctgcctttaaattcaat
tgttttcccaaatcctctgagagggatttaagtttctgttcgccccaaaccaagcaaagt
gaaagtttgctcggcctcctcacttcagacctcccaccaaagcccgactcatttccagag
aagccaccggcccacgagcagcccccaggccaccagaatatcttcaccttcgggaataaa
aacataagcagcttctcgtttgcagattccactccaaacgtgccagctggaggttacttt
gggaagccggagcaaccgtttaagtttggtgaagcaacgacgtttggcataggcaagacg
tcagagctggagaaggccgcagagagcgacgagagcacacacgttgaggaggacgaagac
ggtcctcactttgaaccgatcgtccctcttcctgataaggtggatgtaaaaacaggtgaa
gaagaagaggaggaaatgttctgcaacagggcaaagctgtaccgattcgacacggagaca
aaagaatggaaagaacgaggaatcggaaatattaaaatcctgaaacacaacactaaaggg
aaggtccgcctcctgatgagaagagagcaggtccttaagatctgtgcaaatcactacatc
actgcagacatgctgctgaaacccaacgccggctcggacaaatcctgggtgtggaacgcc
atcgactatgcggatgaagagcctaaacctgaacagctggccattcgcttcaaaactgtg
gatgaggcggctcttttcaaagccaagtttgaggaagcccagcaggtgacgagcaaatca
ccagaaaaacagcaagagaagaaaggggaaacccccaaagacttgggtttactggcttct
cggttcgctcttaaagaaggcgagtgggactgcgccgtgtgtgatgtacgaaataaagca
acggctgcgcagtgtgcagcatgcaacactcccaatccacagtcttcatctaaaccagaa
cttcaggctactactgaagtcaaaaccagcccatttagcttcaagtttggtacagattca
tcaaagcccagtggttcaacctcaacatttacaggatttggtgcttttggaacttcagtt
ccctcctctttcacattcgggatgagctcctcaaaacctactgacaaactggctggtcca
tttggtttcagctttggttcacaaattcccacaaagccagagcagtgggactgtggcaag
tgttctgcaaagaatgaagcatcaacagacagttgtgcttcttgtaaaactcctaaaact
gcagtcaaaacagacgaggcagcacaaactgctccagcaccagaagctcctgctgcacag
tcctttgtatctgcagtcgatgctggatttgctgcacgcttcagcaaaaagccaggacag
tgggactgtgatgtttgtgaagtgagaaatgaagcctctgccaacaaatgtgtttcctgt
caaactccaaacccagcttcaaaatcatccactgtggctccagcagctcaatcatccact
gtggctccagcagctcaatcaaccactgtggctccagcagctcaatcaaccactgtggct
ccagcagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccactgtggctccagcagctcaa
tcaaccactgtggctccagcagctcaatcaaccactgtggctccagcagcaccaactgca
cctgcggcgtcggggtttctggcagattttgccaagaaagatggacagtgggactgcaac
gtctgtttggtcagaaatgaagggtcagcagctcagtgtgtttcttgccagtctccaaat
ccaaatccttctttagaggccatgtttggcaagaaggaaggagaatgggactgtgaggct
tgtctcgtgagaaataaggcctcttccaatgaatgtgtggcctgtaaaacctcaaaccct
aatgctaaaagcacagtcacatctgctgcttctgcctcgtctttcagtttcaactttgga
accacgagttcatccaaccaggctgctggacctgcatttccttttggaagcaatggtgca
tttcagtttggacaaaataaagacaaagcttcagcatctgcattcaagtttgaagctcca
ccggctgtgccagccaccacaacctcctctggattctctttttcaatgcccatcccagct
ggtggcttcaagtttggcgttcaggactctgcaacagattcaacctcatctaataatcaa
acttcaacagggtctgcttccagtatcctcaaaaacatggctgacaaacacaaggagaaa
gaaaatgtgtctacaccttccgtagaccaaacggaaaaagatcaaaatcctttaattgct
ggaaaagccgatacgtttagttttgcagacttggccaagtcctccgaaggaaccttccag
tttggccagaaagatcccaacttcaaaggtttctcgggagcaggggcacaggtattcgca
tcgccacagacgaccccaaccaaggtagaggcctcaaacgaactggaagacgatggcatg
tataaaacagaagagcacgatgacatccagtttgaaccagtggtccagatgcctgacaaa
gtggacctggtgactggtgaggaagatgagcaggtcctctactcccagcgcgtcaaactc
ttccgattcgactccggcaccagtcagtggaaggaacggggtgtaggtaccctgaagttt
cttaaaaatggcacaaatggccggctgagagtgctgatgagaagggatcaagttctgaag
gtttgcgccaaccactggatcaccaccactatgaaccttaagccgctggctggctcagac
aaagcctggatatggatggccaacgacttctctgatggagatgctaaactcgaacagctg
gctgccaaatttaaaaccacggagctggcagaggagttcaaagagaagtttgaggaatgt
cagagacttcttctggatatccctctgcagacgccccacaagctgatggacactggccga
acggctcacctcatcaagaaagcagaggagatgaagtccggtttaaaagacttgaaatcg
tttttgacagatgagaagacgaaaatccaagacgacgaagtgcagggagacattactgcc
gcaagcgaactttccagtttaggggtcaggcctcatggggaaacaacaggccccaccttg
gagtgggataactacgacctacgggaagaagccttggatgacactgctgactcattggtc
tacaccacccctgtttcgagcagccccctgaggaagaacctcttccgcttcggagaatcc
acaagtgggttcagcttcagtttccaacccggcatcagcccatccaagtctcctgcgaag
ctcaacctgagcagagcatcagtgggtaccgacgaggagcaggatacaactcaagacgaa
gagcgagatggacagtactttgaacctgtcgtacctttgcctgacttggttgagatttcc
actggagaagaaaatgagctagtggtcttcagccacagagccaaactgtaccgctatgac
aaagaggtgaagcaatggaaggagaggggcattggagacctcaagatcctgcagagtttt
gagaccaaacgtgtgaggttaataatgaggagagatcaggtgctcaagctctgtgccaac
cactggctctcatccgccatgaggctggagcccatgaagggagcagaaaaggcctgggtc
tggagtgccttggactttgccgaagaaggagatggcaaagttgagcagctggctgtgagg
tttaagatgcaagagactgcaaatactttcaaacaggtctttgaagaggccaaggcagcg
caggaaaaatcagaactcatgactcctgtgacgccaagactctcagcaccctcagaaagt
ggaccatcagcaacatctgaaagcacaactacatctctttgtgggcaagcagctattgct
gttctggaagagacgacacgggaacaaacagccacttctccggccgccaggtcggctgcg
gctggatctcagagtcctgtcaatcccctgaagactgtggtgtctccaccgaagtttgtg
ttcggctctgattctgttcagaagatttttggctctcctaagtcagagtcccaagcatct
acatctgtgtcgggtttgacggccaaagatggtgaaagttcagtcaagcctacaattcct
gcaccagcattcaaaatgcatacagggctggattttaggcttttcaaagataacccaatg
gccttttggaccagcacatccaccgtccaatttgaaagcccaggctctcctcagacggag
gcgtccagctcgggttcggatgacgactccgatgtggagattgtttttgtcagagagccc
acagccgagcaggcggctttagccagggaactacggctgcctctcaccttcttctgctac
aagaacgagccaggctacaccagcgatgacgaacccgatgatgaggactttgagtcagct
gtaagagccttgaatggaaagctctacccagatgctcctgaagcagcagcagcagtctct
gctgaggagccagactgccagtttgtttgggagaagaaaccaacgccagaggaagaggag
cgggcgaagagcctccagcttcccccgacgtttttctgcggcctgagcgccacagacagc
gacccggacagcgaggagcctgaagactttgagacggagctacgcaaagcccagcaagac
ctggttgcccagttaaacagaggtgagccggtctccaccgatcctacagaaccctcgcag
gcctcagcctcggcttcaggcccgtcgaccagcagagcagaacctgcagacggcagaccc
actccagacgatcagctaggagaaaaacccacagacactcagagtgaaactcccagcagc
agcagctctcctatcgacctgtccactaagaagagcccagaaccagagtccagaaccgac
accacagctgctccggattcttcctcctttggcttcaactcacttgaggggttttcgttt
gctgacctcgccaaaaacacagacgaattcgcatttggatctcaagatgccaatttctcc
tgggcgaatgccggagcgactgtgtttggagctgcagctcccactgaggccaaaaactcg
gccgccgaggagggaagtgatgaagaggaggcctccaacaacgtggatatctactttgag
cccatcgtttctctaccggaggtggagactaaatctggcgaggaagatgaggaaatcttg
tttaaagagcgagccaagctgtaccgatgggaccgcgacctcggccagtggaaggagcgc
ggcatcggagacctcaagatcctcttccacccgaccaaacacttctaccggatcctgatg
cgaagagaccaggtgctgagggtttgtgccaaccacaccatctcagagtccatggagctg
aaacccatgaacacctccgccaacgcgctcgtctggaccgccaccgactactcggacggt
gaaggtgaggtggagcagctggcagccaagttcaaaacctcagagttagccgagtcgttc
aggaagaccttctgcgaatgtcagagccgcatcggccaaaccggcgatgacgcctcggtg
ctgtccagagtgcaggaacactccagagacacgaacccgctggtgttcctcagggtggca
gccgacggcgagccgctgggctccatcaccatcgagcttttctctcacattgtccccaaa
acggcggagaacttcagagcgctgtgcaccggagagaaaggcttcggcctgcagaactcc
gtcttccatcgggtcataccggacttcatgtgtcagggaggcgacatcaccaaaggtgat
ggcaccggcggcaaatccatctacggcgccgcgttcgaggacgaaaacttcgacgtccgg
cacacggggccaggcatcctgtcgatggcgaaccgtgggcgcgacaccaacaactcgcag
ttcttcataacactgaagaaagcggaacatttggacttcaaacacgtggtgttcggctac
gtccgggacgggatgagcgtggtgcagaagatgggagagctgggcacgaagggcggggct
cccgccaagaagctggtcatcacggagtgcggacagctgtag
DBGET
integrated database retrieval system
