Poecilia reticulata (guppy): 103482196
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Entry
103482196 CDS
T05149
Symbol
jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X3
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pret
Poecilia reticulata (guppy)
Brite
KEGG Orthology (KO) [BR:
pret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pret03036
]
103482196 (jmjd1c)
Chromosome and associated proteins [BR:
pret03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103482196 (jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
SR-25
DUF3069
C1_2
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
103482196
NCBI-ProteinID:
XP_008436431
UniProt:
A0A3P9N461
LinkDB
All DBs
Position
LG19:27501058..27680776
Genome browser
AA seq
2823 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDEPSEIGDIVRLPWRSGVIRAVSNRDSTNSDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAAGAGGLLQGTKAKHVQWPALVFKPLVGK
NLLSSVTAVEFLLDRQRDFVSNQSACQPYQDEVDNQNPVLRDNPQLQDEVKGWLKNQKVQ
EIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPSMVQ
MTFLDDVVHSLLKGENIGITSRRRSRSSQNNSAHMAGGRPVGTTGNSQSHYTRAQANSPR
PIMMSSGPSPKSSQGPLPPQQQSQSQQTQQTVSQLYHSPGGSGREQRSGRSSRRKGSDSS
VPEEDKDQREETTGRESKAKVKQTANKRRKGEEDEKKAGLKRLKADMTSDLSESSDSENP
HKRTTHSSCCSSSSSSSSSSSSSSSSSEPNSENELKTRSDVIKSAISKMEDEEKPVLKGP
KVNDTSSFIRCLSPWAELQAAEDIKKSAVKDSGQILTNEEEQLETVTLITQSPLQQASLI
PDMVQSGAGENTNTVKASSPSQTPSLSQLHGNSVIDITDDAQATVHQESSEAVSALLASQ
KDESVALSPYLPLNTSPISSPPVSTSPAPPEGCRRAEVDSLMKPPGVTGGSVTLPKSLNG
KVEFTPAEVMRPVSSIAETTPLVDKEKTVVSPHQLHHQQQQLHEQQHTQQMQQYTAVHHG
VPLSLSEGSSKPPQQQPPLHKTLIPTLDSAKSKVSPSHTSSPVQKPQPPSSSHNQSYPNP
NPADPLKAKSHPGLLDISKPKANTSPEVSKDKILRYSDSSPSARLPIKVDLVEPPRSGFK
PVGLRSEAGGVSASGSTKSPLIIDKNETFTVYRDPALVRSDADNSVTPSNSSNHVAAYLH
PHLHPLHPPSPHSPCLTSASHPHGASHLLAPPHSSPLPHPHLLPPGMLPAMHPPPGSLFA
GHPRLDSPGSLSHLALPHPAATHQQQFLQGHGGAAGLSLFPIIWPYPNGTPPPYPPGLSL
PPTAKWVHSENPITVNSEASLIRNTASPWLHQAAGSSTDGLGLLNHIPVRPASADAHRPS
AKISTHTNPSMSKTAMDVHKEDVDKKGFVDPVRNLTFAQIKPDHTDRSRTPTGKDVHLHR
LYLDPHSKARLTNTQEVFHAADRTIKYKEENRQILKESIEVAPFTAKILRPSDPGLDRSK
EPAFPVRIPALASSSPKTSHAHPHVIQPEKSSYYTTISNSVVNEPPRLYPSKEQSSYYDK
VVGVSIGATVQSQGSQSLVSYSSKASLSKPPPLIKHQPEGGEGLAGKITEQLSQQATLIP
HQHLTSMDRKDRHSPAASNTTSTSSSLSLVSNHHQHQQHQLRAMPSLYRAPVYHPPTQLS
LERKETAEREKERDKAGYGGRLSPPTLTPIQPVSLPTAGTKTSAEQQKPPTLVPELRDVK
VHGIGAAVTSVASTISGDVMTDGWHGRDLIQERGSVFCRDTDVLRGKPQAAMASVIVRPT
TSVRYESPVGANKSGATLRREVSMSYPSRLPGECPHMREAAQEAGGGRVIQVNANTDDVS
VPYKVTSMQSYQGPVGVSTTNSMCRSPVVFSPAVDVQNKPPKSGYSAEFGNLKRVGGWLP
SLSGEGVDSHSISPGLSLPLTNSVATALLAQSNTSSSSPITASNQPNLSSFVHLKKHKAA
LAAAQSKTNLPAGPASMPTGNTSSIVDPVEKTPSHSSTPPPCSSGVSSGEISNTSCAAGS
TTPGTSSPLPNGQSSGSTSLGSAQPSNYHKLKKAWLTRHSEEDKTSTTASSSTKAEKLLT
TTTSMCNTTAMSDMIKPCTVNLSASTSSEVDMNKDFGSKSERNLEGKNAGSTGGGGEEKK
SSHLSRRGFKRSYDSGSESGGDDSDTSESKMEGRAKRQSKPTYKKKQNDMAKRKGDHEKD
DEDVKPNGIFRSAREKTKLKLASSNGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPN
LQKCRECRVVRSKKGEEPAHSPVFCRFYYFRRLSFNKNGVIRMDGFSTPDQFDEEALALW
VPGPLEDSHLDQTTAKYILSYIGDKFCQMVMTENTAASWVKKDAKLAWKRAVRGVREMCD
ACEATLFNIHWVCQKCGFVVCLDCYKAKERRSCKDKELYGWLKCVKGQPHDHKHLMPTQI
IPGKVLTELVTSIHTLRDKSNIPFKCPCSTKQNVLTKLPATNGVTQVLQNVLNHSNKLSL
VKAEPGSQQNPEEGGAKAETNGGHGGGSSPGSDHNSTPVTPPESQSPLHFLADLAEQKSR
EEKKENKQSVVPGKCVKEEKDGEGVLQQCKNPSLVANSTEQGSTLRDLLTTTAGKLKLGS
TDAGIAFAPVYSTAAQTGKDGRTMPNILDDIIASVVENKIPASRQSITTKLSTKQDHMTP
SNNSNLTTVGTDDAKAQRKKSATLPTVVPEDSANQYPDIPHSWLNNRRLLWLKDHRNQHN
WKLFRECWKQGQPVLVSGIHKRLNVNLWKADSFNQEFADHQGDLLNCKDQVVSNSGIKEF
WDGFEDITKRPKSKDSEPMVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGSLN
LASHLPSFFVRPDLGPRLCCAYGVAASQDQDFGTANLHVEVSDVVSVLVYVGVAKGNGVL
SKTGVLKRLEEEDLDEGVRRRLKDSSEIPGALWHIYLNRDMDKVREFLHKVCKEEGLDVC
LDQDPIREQSWYLSRKQRQRLLDEHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVI
NDFVSPEHVGRSFHLTQELRANKEEVNYEDKLQVKNILYHCVKEVVSSLKRNNSDKDLKE
DNS
NT seq
8472 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggccggagctggtcggaaaacggttcctctgtgtcagcggggac
gagccatctgaaatcggcgatattgttcggttgccatggaggtccggggtaatacgagcc
gtcagcaaccgtgacagcaccaattccgacctgacggtgtatgtggaatttgatgaccaa
gagtgggagaagagggagtgggtgaaggtctatgaggatttccagctgtttctcctggag
caccagctggtctgggcaaagagaaaggaaggagcagctggagctggaggccttctgcag
ggaaccaaggccaagcacgtccagtggcctgcactggtgtttaaaccattggttgggaag
aacctgttgtcttcagtaacagcagtggagttcttgctggaccgtcagcgggactttgtc
tctaaccagtcagcctgccaaccatatcaggatgaggtggacaatcagaacccagtgtta
agagacaaccctcagctccaagatgaagtgaaaggctggcttaaaaaccagaaagtgcag
gaaatttttatgcaaggaccctactccctcaatggctaccgtgtgcgtgtgtacagacaa
gactcggccacccaatggttcactggaatcattacgcaccacgacctcttcagtagaaat
atggttgttatgaatgaccaggtgctagagcctcagaatgtggacccatccatggtgcag
atgacctttctggatgatgtagttcactcattgctaaaaggagaaaacatcggcatcacc
tcgagacgaaggtcgcgatccagccagaacaactctgctcatatggcaggagggagaccc
gtcgggaccactggcaactctcagagtcattacacacgagcccaggccaatagcccccga
cccattatgatgtcatcaggaccaagccctaagagctcccaggggcccctgccccctcag
caacagagtcagtcacagcaaacccagcagacggttagccagttgtaccactcaccaggc
ggcagcgggagagagcagcgcagcggccgctcctccaggaggaaaggctctgacagcagc
gttccagaagaggacaaggaccagagagaagaaaccactgggagagaatctaaggccaaa
gtaaagcagactgcaaacaaacgcaggaaaggtgaagaagatgagaagaaagcaggtctg
aagagactgaaggctgacatgacttcagatctgtcagagagcagtgactcagaaaaccca
cacaagaggaccacccactcatcatgctgctcctcctcgtcatcatcctcgtcatcttcg
tcgtcgtcctcctcttcctctgagcctaactctgagaatgagctaaagactcgcagtgat
gtgataaaaagtgccatttccaaaatggaggatgaggagaagccagtgttaaagggacct
aaagtgaatgatacctcgtctttcatcaggtgcttgtctccgtgggcggagctccaagca
gctgaggacattaagaaaagtgcagtaaaggattcaggtcaaattctgacaaatgaagag
gagcaattggagacagtgactctgatcacccagtctccactgcagcaagcatctctcata
cctgacatggttcaaagtggagctggggagaacaccaacactgtaaaagcatcatctcca
tcccagactccatcactgtcccagctacatggcaacagcgtgattgacattacagacgac
gctcaggccaccgtacaccaggagagctcggaggcggtctcggcactgctcgcctcccag
aaagacgagtcagtggccctctccccgtacctccccctcaacacctcccccatctcctca
cctcctgtatccacatcccccgccccaccggaggggtgccgcagagcggaggtggactca
ctcatgaagccaccgggagttactggaggcagcgttacattgcccaaaagtttaaacggc
aaagtggagtttaccccagctgaggtcatgaggccggtctcatccatagctgaaactacg
cccctggtggacaaggagaaaactgttgtttctcctcatcagcttcatcatcagcaacag
cagctgcatgagcagcaacacacacaacaaatgcaacaatacacagctgtccaccatgga
gttcctctttctctatctgagggttccagtaaacctccacagcagcaaccccccctccac
aagaccctcatccccaccctggactcggccaaatccaaagtgagccccagccacacatcc
agtcctgttcagaaaccccagccccccagcagctctcacaaccagtcatatcccaacccg
aacccagcggaccctcttaaagctaaatcccacccgggcctcctggacatctccaaaccc
aaagcaaacacttctcctgaggtcagtaaggataaaatcctgaggtactccgactcttcc
ccaagcgctcgcttgcccatcaaggtggacttagtggagcctccacgctctggtttcaag
ccagtggggttgcggtcagaagctggtggagtcagtgcgagcggcagcacaaagagtccg
ctgatcatcgacaagaacgaaaccttcactgtttacagggacccagcattagttcgctcg
gatgcagataactctgtcactccatctaactcctccaaccatgtggcagcctatctgcat
ccccacctgcaccccttgcacccaccctctccacactccccttgcctaacatctgcatcc
catccccatggcgcctcccacctcctcgcccctcctcattcctcacccctccctcatcca
cacctcctgccccctggaatgcttccagctatgcatccccccccaggctctctgtttgca
ggacaccctcggctggactccccaggcagtctcagccatcttgcccttcctcacccagca
gccacacatcagcagcagttcttgcagggtcatggtggagcagcaggtcttagtttgttc
cccatcatatggccttaccctaatggaacgccacctccataccccccaggactcagcctc
ccaccaactgctaaatgggtgcactctgaaaatcccatcactgtgaattctgaggcgtct
ctaattaggaacactgccagtccatggctgcatcaggctgctggtagttccactgacggt
ctcggtttactgaaccacattccagtcagaccagccagcgctgatgctcaccgcccctct
gctaagatcagcacgcataccaacccatcaatgtctaagactgccatggatgttcataaa
gaagatgtggacaaaaagggttttgtggatcccgtcaggaatttaacatttgctcaaata
aaaccagaccacacagacagaagtcgtaccccaacaggaaaagatgtccatctgcaccgc
ctttacctggatccgcacagcaaagcccgcctgacaaatacacaggaagtatttcatgct
gcagaccggaccattaaatacaaggaggagaatcgtcaaatactgaaggagagcattgag
gttgcgcctttcactgctaagattctgcggccctctgaccccgggctggacaggagcaaa
gagccagcattccctgtccggataccagctcttgcctcttcaagtccaaagaccagtcat
gctcacccccacgtcatccagccagaaaaaagcagctactacaccacaatctcaaacagc
gttgtgaatgagcctccaaggctgtatccctccaaggagcaaagttcttactatgacaaa
gtagtgggggtcagcattggggcgactgtgcaaagccagggaagtcagtctttggttagt
tacagctccaaagcttctctctccaagcctcctcctcttataaagcaccaaccagaggga
ggagagggtttagcagggaaaattactgagcagctcagccagcaggccactcttattcct
catcaacatttgacgagcatggataggaaggatcgccacagtcctgccgcctccaacacc
acctccacgtcgtcctccttgtccttggtttccaaccatcatcagcatcagcaacaccag
ctcagggcaatgccatctctgtaccgagctcctgtctaccatccacccacacagctgtcc
ttggagcgcaaagagacagcagagcgagagaaggagagggacaaagcgggctatggtgga
cgtctgtcacccccgaccctcacacccatccagccggtcagcttaccaacagctggaacc
aaaacatcagcagagcaacagaagcctcccacgctggtgccagaactcagggatgtcaaa
gtccatggaatcggtgctgctgtcacctcagtggcctccactatcagtggggatgttatg
acagatggatggcatggtagagatctgattcaagaaagaggaagtgtgttctgtagagac
acagatgtgttgaggggtaagcctcaagcagcaatggcctccgtcattgtacgtccaact
acgtcagttaggtatgaaagtccagttggtgctaacaaatctggtgctacattgcgtagg
gaagtttctatgtcctacccttcaaggctcccaggggaatgtccgcatatgagggaggct
gctcaagaagctggaggaggcagagttattcaagtcaacgcaaatacggacgacgtttct
gttccgtataaagtcacctccatgcaaagctatcagggacctgtaggtgtcagcactaca
aactctatgtgcaggtcccctgttgtgttctcaccagctgttgatgttcagaataaacca
ccaaaatcaggatattcagccgagtttggaaaccttaaacgtgttggaggctggctgccc
agcctctcaggagaaggtgttgactcacactccatatcaccaggactgtctttgcctctg
actaattcagtagcaacagccctacttgctcaaagcaacacttcatcttctagtcccatt
accgcctctaatcagcctaacttgtcctcttttgtacatctcaaaaagcacaaggctgcc
ttggctgcagcccagtctaagaccaacctccctgctggtcctgcatcaatgccgactgga
aacacttcatcgattgtggatccagttgaaaagacacccagtcacagctccacccctcca
ccctgttctagcggagtctcctcaggtgagattagtaacaccagctgtgcagctggtagc
acaacaccaggcacgtccagtccgttacctaatggccagtcctccggatcgacctcactg
ggttcagcacagcccagtaactaccacaagctgaagaaagcctggttaacacgacactct
gaggaggacaagacttctacgacggcctcctctagcacgaaagcagagaagctgctcacc
accacaaccagcatgtgcaacactacggccatgtcagatatgatcaagccctgtacagtc
aatctcagtgcctccacgtccagtgaggtggacatgaacaaagactttggaagcaaaagt
gaacgaaacctagaggggaagaatgctggatcaacaggtggaggtggagaggaaaagaaa
tccagtcatctctcaaggcgagggttcaaacgctcttatgactctgggtcagaaagtggc
ggagacgactctgacacaagtgaaagcaagatggagggcagagcaaagcgccagtctaaa
ccaacctataagaagaagcagaatgacatggccaaaaggaaaggagaccatgagaaggac
gatgaggatgtgaagcccaacggtatctttcgatcagctcgtgagaagaccaagcttaaa
ctggcaagcagcaatggcatccctcgttctgtgctgaaggactggaggaaagtgaagaag
ctcaagcagacaggggagtcctttctgcaggatgactcatgttcagaaattggacctaac
ctccagaagtgtcgggagtgccgggtcgtccgcagtaaaaagggggaggagccagcacat
tcccccgtcttctgccggttctactatttcagacggctttccttcaacaaaaatggagtc
attcgaatggatggcttctccaccccagaccagtttgacgaagaggccctggccttatgg
gtccccgggcccctggaggacagccacttggaccagaccactgccaagtacatccttagt
tacataggagataagttctgtcagatggtgatgactgaaaacactgcagccagctgggtc
aagaaggatgcgaagctagcatggaagcgggcagtgagaggggttagagagatgtgtgac
gcttgtgaagcaacactctttaacatccactgggtctgccagaaatgtggctttgtggtc
tgcctcgactgttacaaagccaaggagagaaggagttgcaaagataaagagctgtatggc
tggttgaagtgtgttaaaggtcaaccccatgaccataagcatctcatgccaacacagatc
atccctggcaaagtgttaacagagctggtgacctccattcacaccctgagagacaaaagc
aacatcccgtttaaatgtccgtgttccaccaaacagaacgttctcaccaagcttccagca
accaatggagtgacacaggtgctacagaacgtgctgaaccacagtaacaagctgtctctg
gtgaaggctgagcctggctcccagcagaacccagaggaaggaggagccaaggcagaaacc
aatggagggcatggggggggcagcagtcctggcagtgaccacaacagtacacctgtcacc
ccacctgagtctcagtccccgcttcacttcctggctgaccttgcagagcagaaatccagg
gaggaaaagaaagaaaacaagcagtcagtggtgccaggtaaatgtgtgaaagaggagaag
gatggggagggggtcttgcagcagtgtaaaaacccctctctggtggctaacagcacagaa
cagggctccacgctcagagacctgctcaccaccactgcaggaaagctcaagctgggttct
actgatgcaggaattgcctttgcacctgtttattctactgctgcacagactggaaaggat
ggccggaccatgccaaacatcctggatgacataattgcttcagtggtagagaataaaatc
cctgccagccgccagagcatcaccaccaagctgtcaactaaacaagatcacatgacccct
agcaacaacagcaacctcacaaccgttggtacggacgacgccaaagcacaaaggaagaag
tcagccactttgcctacagtggtgccggaggattccgccaatcagtacccagacattcct
cactcgtggctaaacaacaggcggctgctgtggctcaaagatcaccgcaatcagcacaac
tggaagctgttcagagagtgctggaaacaaggacagcctgttttggtgtctgggatccat
aagcgactgaatgtcaacctgtggaaggctgattcctttaaccaggagtttgcagaccac
cagggagacctgctcaactgcaaagaccaggtggtgtccaactctggaataaaggagttc
tgggatggatttgaagacattaccaagcgaccaaagtccaaagacagtgaacccatggtc
taccggctgaaggactggccgtctggggaggagttcatggctctgatgccatcaaggtat
gacgacctgatgaagaaccttcctttgccagagtattcggatccagaagggagcctcaac
cttgcctcacacctgccatcttttttcgtcaggcctgacctcgggccaagactatgttgt
gcatatggtgtagctgcatctcaggatcaagactttggaactgccaacctccatgttgaa
gtatcagatgtggtgtctgtcctggtttatgtcggagtggcgaaagggaatggagtccta
tccaaaaccggagtgttgaagcgtcttgaggaggaagatttagacgagggcgttcgaagg
cggctgaaggactccagtgagatacctggagcactttggcacatctacctcaacagagac
atggacaaagtccgggaatttttgcacaaggtgtgtaaggaggaaggtctggatgtgtgt
ctggaccaggacccaatcagagagcagagctggtacctgagcaggaagcagcgccagcga
ctcctggatgagcacggagttcaaggctggactgttgttcagttcctaggagactcggtc
ctcattcctgcaggggccatgcaccaggtccagaatcttcacagctgtgtccaagtcatc
aatgactttgtgtctcctgagcatgtgggcaggtccttccacctgacccaggagctgcgc
gccaacaaagaggaggtcaactatgaggataagctgcaggtgaagaatatcttgtaccac
tgtgtgaaggaggtggtgagctcactgaagaggaataactctgacaaagatctgaaggaa
gataattcatga
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integrated database retrieval system
