Candidatus Peribacter riflensis: PeribacterA2_0431
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Entry
PeribacterA2_0431 CDS
T04147
Name
(GenBank) recombination protein RecA
KO
K03553
recombination protein RecA
Organism
prf
Candidatus Peribacter riflensis
Pathway
prf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PeribacterA2_0431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prf03400
]
PeribacterA2_0431
DNA repair and recombination proteins [BR:
prf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PeribacterA2_0431
RecFOR pathway proteins
PeribacterA2_0431
TLS (translesion DNA synthesis) factors
Other SOS response factors
PeribacterA2_0431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
Rad51
ATPase
AAA_24
ATPase_2
AAA_25
AAA_16
AAA_22
MobB
CobU
DnaB_C
CbiA
AAA_35
ABC_tran
nSTAND3
AAA_14
AAA
TK
Motif
Other DBs
NCBI-ProteinID:
ALM09815
UniProt:
A0A0S1SHE2
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All DBs
Position
complement(456207..457268)
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AA seq
353 aa
AA seq
DB search
MAKALSSKADMTTLPKESTHSTSKNPKEEALKAALAQIEKQYGAGAIMRMGDEHAVKIEC
IPSGATSLDIALGGGIPKGRIVEIYGPESSGKTTLALHVIAQAQKRGGKAAFIDAEHALD
VQYAKKIGVDIDALLVSQPDDGEQALEITETLVRSAGIDLIVVDSVAALTPRAEIEGMMG
DSHLGLHARLMSQALRKLTAIVSKTNTTIIFINQMRMKIGVMFGNPETTTGGNALKFYAS
VRLDVRRIDKILEKGEGDQEIVGNRTRVKVVKNKIAPPFRQAEFDILYAKGINREGDLLD
LGVKYGIVEKSGTHFRYGEEALGQGRIAACLTLAQQMKLTEQLEKEVRKAAEI
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcactttcttccaaagccgatatgaccactctgccaaaagagtcaacgcac
tccaccagtaagaatccgaaagaggaagccctgaaggccgctctcgcgcagatcgaaaaa
cagtacggcgccggagccatcatgcgcatgggtgacgaacacgccgtcaagatcgaatgc
atcccttccggtgccacttccctcgacatcgcactcggtggcggcattcccaaaggccgc
atcgtcgagatctacggtcccgaatcttccggcaagaccaccctcgcgctccacgtgatc
gcacaggcgcagaaacgcggcggcaaggcagccttcatcgatgcggaacacgcattggac
gtgcagtacgccaagaagatcggcgtggatatcgatgccctcttggtctcgcagccggat
gacggcgagcaggccctcgagatcaccgagaccttggtacgttcagccggcatcgacctg
attgtcgtggactccgtggcggccctgacaccgcgcgcggaaattgagggcatgatgggc
gacagccatttgggtttgcatgcccgcctcatgagccaggcgttacgcaaactcacggcc
atcgtcagcaagacgaataccactattatcttcatcaatcagatgcgcatgaagatcggc
gtgatgttcggcaatcccgagaccaccacgggcggcaacgccctcaagttctacgcctcc
gtccgtctggatgtgcgccgcatcgataaaatcctcgagaaaggcgaaggggaccaggaa
atcgtcggcaaccgcacccgcgtaaaagtcgtgaagaacaaaatcgctccgcccttccgg
caggccgagttcgacatcctctatgccaagggcatcaaccgcgagggggatctgctcgat
ctcggggtcaaatacggcatcgtcgaaaaatccggcacgcacttccgctacggagaagag
gcactcgggcagggtcgcatcgccgcctgcctcacgctcgcccagcagatgaaactgacg
gagcaattggaaaaggaggtccggaaagcagcggagatttag
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