Providencia rettgeri: RB151_005890
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Entry
RB151_005890 CDS
T04571
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
prg
Providencia rettgeri
Pathway
prg00071
Fatty acid degradation
prg00280
Valine, leucine and isoleucine degradation
prg00310
Lysine degradation
prg00362
Benzoate degradation
prg00380
Tryptophan metabolism
prg00410
beta-Alanine metabolism
prg00640
Propanoate metabolism
prg00650
Butanoate metabolism
prg00907
Pinene, camphor and geraniol degradation
prg00930
Caprolactam degradation
prg01100
Metabolic pathways
prg01110
Biosynthesis of secondary metabolites
prg01120
Microbial metabolism in diverse environments
prg01200
Carbon metabolism
prg01212
Fatty acid metabolism
Module
prg_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RB151_005890 (fadB)
00650 Butanoate metabolism
RB151_005890 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RB151_005890 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RB151_005890 (fadB)
00310 Lysine degradation
RB151_005890 (fadB)
00380 Tryptophan metabolism
RB151_005890 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RB151_005890 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RB151_005890 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RB151_005890 (fadB)
00930 Caprolactam degradation
RB151_005890 (fadB)
Enzymes [BR:
prg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RB151_005890 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RB151_005890 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RB151_005890 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
RB151_005890 (fadB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF6471
DAO
Motif
Other DBs
NCBI-ProteinID:
APC10299
LinkDB
All DBs
Position
complement(673269..675461)
Genome browser
AA seq
730 aa
AA seq
DB search
MLYQSETIYIQWLKKGIAELVFNSPGPINKMDTHTVASLDEAVTVLEQQTDLQGVIFRSD
KPAFIVGADIKEFLSLFEASKETLSNWLQYANTIFNRIEDLPVPTICAINGYALGGGCEC
VLSTDFRIASPDARIGLPETKLGIMPGFGGSVRLPRLIGLDSALEIITAGKDINAAQALK
FGLIDAVVDTQLLPQSALTIIESAIAGALNWQKKRQPKLEPLQLSPIEQTMSFNVAKGMV
YQAAGKHYPAPMAAVNTIEKAANCARDEALKHETAAFVPLAHSDVARALVSIFLNDQHVK
SNSKKLSQHVSTPTHAAVLGAGIMGGGIAYQSASRGVPVLMKDINEKSLELGIEEAQKLL
NKQFERGKITAAQMATTLAAIHPSLSYSGIESSQIVVEAVVENPKIKAAVLTEVESLIAP
DTLLASNTSTIPISTLASSLKRPENFCGMHFFNPVHRMPLVEIIRGKQTSEDTIAKVVAY
ANKMGKTPIVVNDCPGFFVNRVLFPYFAGFNLLLQDGADFREIDKIMEKEFGWPMGPAYL
LDVVGIDTAFHAEQVMAEGFPERMSKTGKNAISVMFEQQRFGQKNGKGFYLYEKDKKGKP
KKVNDPHTDELLASICSTKRSFTKEEIIARMMIPMVNEVVRCLEEGIIQSPSDADIALVY
GLGFPPFRGGAFCYLDTLGSQSYFKTAESLEHLSPLYQAPKGLKEKAVTNARYYPQPPVV
AVDVKKVARG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaagtgaaacaatctatattcaatggttgaaaaaagggattgcagaactg
gtttttaactcaccagggccgattaataaaatggatacccacaccgttgcttcacttgat
gaagccgtgactgttctagagcagcaaaccgatctgcaaggtgttattttccgttctgat
aaaccagcgtttattgttggagctgatattaaagagtttttatctctatttgaggcatca
aaagaaacgctaagtaattggttacaatatgccaataccatttttaaccgcattgaagat
ttgccagttcctactatctgcgctatcaatggctatgctttaggtggtggctgtgagtgc
gttttatccactgattttcgtatcgcatcacccgacgctcgaattgggcttcctgaaaca
aaacttggtattatgcctggattcggtggttccgtacgtctgcctcgtctaatcggttta
gatagtgccttagaaattattaccgcaggtaaagatatcaatgccgctcaagcattaaaa
tttggtcttatcgacgctgttgttgatacccaactcttacctcaatctgcactgactatc
attgaatcagctattgcaggtgcactaaattggcagaaaaaacgccaaccaaaactagag
ccattacaattaagccctattgaacaaacaatgagtttcaatgtggcaaaaggaatggtg
tatcaggctgctgggaaacattaccctgcgccaatggctgctgtaaatacaattgaaaaa
gcagcaaactgtgcacgagatgaagcattaaaacatgaaaccgcagcttttgtacctctc
gcccatagtgatgttgctcgcgcattagtcagtatttttctgaatgatcaacatgttaaa
tctaatagcaaaaaactctcacagcatgttagtactccaacgcatgccgcagtgcttggt
gctgggattatgggtggaggcattgcctatcagtccgccagtaggggcgtgccagtttta
atgaaggatatcaatgagaaatcattagagttagggattgaggaagcacaaaagctgtta
aacaagcaatttgaaagagggaaaatcaccgctgcacaaatggcaaccacattagctgct
atacacccttcattatcctattcaggtattgaaagcagccaaatcgtcgttgaagctgtt
gttgaaaaccccaaaattaaagccgctgtgctcactgaggtagaatcccttattgcccct
gataccttattagcatcaaacacctctaccattccaatttcgacacttgcaagctcacta
aaacgcccagaaaatttctgtggaatgcatttcttcaacccagtacaccgtatgccatta
gttgaaattatcagagggaaacaaacatctgaagatactatcgccaaagttgttgcctat
gcgaataaaatggggaaaacccctattgtcgttaatgattgccctggtttctttgttaac
cgagtccttttcccttatttcgcaggttttaatttacttttgcaagatggggctgatttt
agagaaatagataaaatcatggagaaagaatttggttggcctatgggccctgcttatctt
ctcgatgttgtcggtattgatactgctttccatgctgaacaagtcatggccgaaggtttc
cctgagcgtatgagtaaaacaggcaaaaatgccataagtgtgatgtttgaacagcagcgt
tttggtcaaaaaaatggcaagggcttttatctatatgaaaaagataaaaaaggtaagccg
aaaaaagttaatgaccctcatacagatgaactactcgcttctatttgctcaacaaaacgt
tcttttaccaaagaagaaattattgctcgaatgatgatcccaatggtcaatgaagttgtc
cgttgtttagaagaaggcattattcagagcccatcagatgcagatattgctctcgtgtat
ggtctagggttcccaccatttagaggtggcgcattctgctacttagatactttgggtagc
cagtcttatttcaaaacagcagaatctttagagcatttaagccctctttatcaggcacct
aaaggtttaaaagaaaaagcagttactaatgctagatattacccacaaccacctgttgtg
gccgttgatgtcaaaaaagttgcgaggggttaa
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