Providencia rettgeri: RB151_021110
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Entry
RB151_021110 CDS
T04571
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
prg
Providencia rettgeri
Brite
KEGG Orthology (KO) [BR:
prg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prg03016
]
RB151_021110 (rnd)
Enzymes [BR:
prg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RB151_021110 (rnd)
Transfer RNA biogenesis [BR:
prg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RB151_021110 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
FlgN
Motif
Other DBs
NCBI-ProteinID:
APC11783
UniProt:
A0A1J0E789
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All DBs
Position
2289526..2290647
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AA seq
373 aa
AA seq
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MNYRLVTTDSELAQICQEASHAPWLALDTEFVRTRTYYPQLGLLQLYDGKQVSLIDPLSI
TDFSPFKALLTNPNQIKFLHAGSEDLEVFMHDFGCVPEPMIDTQIIAAFLGYPISCGFAS
LVSEHLGIELDKSESRTDWLARPLSEKQCDYATADVLYLLPLAEILMAKVMEAGYLEDVK
DECQRVVARRQKTLKPEKAYLNIHNAWQLRDEQLACLQLLAAWRLNQAKARDMAINFVVK
EEHLWKVARFLPGSLGELDSLGLTGQEIRCHGKRLLAIVDQAKKLDASQYPAPVANITEQ
SEYKNLFKEIKAIVKDIAENEKFNAELLASRRQINQLLSLHWGLKTSATPPELLDGWRGK
LLAKPISKLLTNV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcgtttagtaactacagatagtgaactagcccaaatatgtcaagaagcgagc
catgcgccatggcttgcgttggataccgagtttgttcgtaccagaacgtattatcctcaa
ttaggtttgctacagctgtatgatggaaagcaagtttcgttgattgacccgttatcaata
acggattttagcccgttcaaagcacttttgactaacccaaatcaaattaagttcttacat
gcgggcagtgaagatctcgaagtctttatgcatgatttcggctgcgttcctgaacccatg
attgacacgcaaattatagcggcttttttagggtatcctatttcgtgtggttttgcgtcg
ttggtatcagaacatctgggaattgagttggataaaagtgagtctcgtactgattggtta
gcgcgcccattgagtgaaaaacagtgtgattacgcaacagcggatgtgctgtatttacta
ccattagctgaaatcctgatggctaaagtgatggaggctgggtatttagaagatgttaaa
gatgagtgccaacgtgttgtcgctcgtcgtcaaaaaacactcaaaccggaaaaagcatac
ctaaatattcataatgcttggcaattacgtgatgaacaactcgcgtgtttacagttactc
gcggcatggcgattaaatcaggcaaaagctcgtgatatggcaattaactttgttgtaaaa
gaagagcacttgtggaaagtggctcgttttttaccgggttctctcggcgaacttgatagc
ttaggtttgacggggcaagaaatccgttgtcacggtaagcgtttgttagctattgtggat
caagctaaaaaacttgatgcaagccaatatcctgcacctgtggcaaatattactgaacaa
agtgaatataaaaatctctttaaagaaattaaagctatcgtcaaagatatcgctgaaaat
gaaaaatttaatgcagaattattagcctcaagaaggcagattaaccagttactttcttta
cattgggggctaaaaacttcggcaacgccccctgagcttctcgatggttggcgtggaaag
ttgcttgcaaaacctatttcaaagttactaacaaacgtataa
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