Psychrobacter sp. PRwf-1: PsycPRwf_0887
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Entry
PsycPRwf_0887 CDS
T00541
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw01501
beta-Lactam resistance
prw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PsycPRwf_0887
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PsycPRwf_0887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prw02000
]
PsycPRwf_0887
01504 Antimicrobial resistance genes [BR:
prw01504
]
PsycPRwf_0887
Transporters [BR:
prw02000
]
Other transporters
Pores ion channels [TC:
1
]
PsycPRwf_0887
Antimicrobial resistance genes [BR:
prw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PsycPRwf_0887
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PsycPRwf_0887
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PsycPRwf_0887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CO_deh_flav_C
Motif
Other DBs
NCBI-ProteinID:
ABQ93837
UniProt:
A5WDU6
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All DBs
Position
complement(1051911..1053671)
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AA seq
586 aa
AA seq
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MTTSVTLIPDSKSRSVSGSVMHTRKKWSRLFGLSALTVAISACQSVPLADTSPTVARPNI
PLNPGENYELYGNNQVPSSLAAVRWQSFYSDPKLKALIQMGLDNNKDVKQAVLAIQKAQA
QYRITDSNDAPNLGLNGDYSYGASNARDRNPSDSFNVGLGMAAYELDFWGKVASLKDQAL
QNYLSTTAARDTAQVSLIANIAKSYVNLSYQQKQLELAISTLQTREESLRITQARLAAGI
DSKAPSLQAAASAETARIAALNAQSGVLRAKNALKFLVGTQISEDMMPDPAIPSITSSQV
LSAGLPSDLLRYRPDVLQAEYNLKAAGANIDVARAAYYPSISLTGNLGYSSSDLSDLFKS
SAGSWSFGPSIRLPLFDAGQRDANYEVAQIERDQAVANYESTVEAAFKEVNDVLADRATL
DARTQAEYRLQENYQGLFDISEARFKAQVDDYLAVLDAQRSLFSTQQSILNLEQERLNNQ
IELYQVLGGGANLGAVAVPTPKYQNLVNVLDNKTNKQKAVNAVEASKGPRIVTAQEAYLL
EQQKPVKVVEQKQATPVDINNDNNTDAYISVVETTTEPADSKVVQH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctctgtaaccttaattcctgattctaaaagtcgaagcgtgagtggttctgtt
atgcatacccgaaaaaaatggtcccgtttgtttggtctatctgctttgacagtcgcaatc
agcgcctgtcaaagtgttccactggccgacacaagccccacagtagcccgccccaatatt
cctttgaatccgggcgaaaactatgagctttatggcaacaaccaagtgccttcaagccta
gcggctgtacgttggcagagcttttattctgaccctaagctaaaagcgcttatccaaatg
ggtctggataataacaaagatgttaagcaagctgtcctagccattcagaaagcccaagct
cagtaccgcattactgacagtaatgatgcgcctaacttaggtttgaatggagattactca
tacggggcaagtaatgctagagaccgtaaccctagtgacagctttaatgtaggcctaggt
atggcggcttatgagcttgatttttggggtaaagtggcaagcttaaaagaccaagcgctg
caaaattacctcagcaccacagccgcacgtgacaccgctcaggtcagcttgattgccaat
attgccaaaagctatgtcaatttaagctatcagcaaaagcagctagagcttgccattagt
acattgcagactcgagaagagtcgctacgcattacgcaagcccgcttggcagctggcatt
gactcaaaagcaccttcgctgcaagcagctgcctctgctgagacggctcgtattgctgca
ctaaatgctcaaagcggcgtattaagagccaaaaatgctttgaaattcttggtgggtacc
cagattagcgaagacatgatgccagatcccgctattccttcgattacttcaagccaagta
ttaagcgcaggcttgccaagtgacttattacgctaccgccctgatgtcttgcaagctgaa
tacaatctaaaagcggcgggggctaatattgatgtggcccgagctgcctactacccttct
attagtttgacaggcaacttaggctactcaagtagcgacttatctgacttatttaagagc
agtgctggcagttggtcgtttggaccctctattagattgcctttatttgatgccggtcag
cgtgatgccaactatgaagtggctcaaattgagcgtgatcaagccgttgccaattacgaa
agtacagtagaggcggcgtttaaagaggtcaacgatgtactggcagatcgagcgacatta
gatgccagaactcaagcagaatatcgcttacaagagaactatcaaggtttatttgatatc
tctgaagcccgctttaaggcgcaagtagatgactacttagcggtactagatgctcagcgc
tcactgttctccactcagcagtctattttgaaccttgagcaagagcgtctaaataaccag
attgagctgtatcaagtgttaggtggcggtgccaacttaggtgcggtggcagtacctacc
cctaaatatcaaaacctggtcaatgtccttgataataagaccaataagcaaaaagcggtc
aatgctgttgaagccagtaaagggccaagaattgtcaccgcccaagaagcttacctgctt
gagcagcaaaagcctgtgaaagttgtggaacaaaaacaagcaaccccagtggatataaac
aacgacaacaacaccgatgcttatatctctgtggtagaaaccaccactgagcctgctgac
tctaaagtggttcagcattag
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