Stutzerimonas stutzeri A1501: PST_0847
Help
Entry
PST_0847 CDS
T00511
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psa
Stutzerimonas stutzeri A1501
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_0847 (sbcC)
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PST_0847 (sbcC)
Archaeal homologous recombinant proteins
PST_0847 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABP78544
UniProt:
A4VHU3
LinkDB
All DBs
Position
complement(940043..943696)
Genome browser
AA seq
1217 aa
AA seq
DB search
MRILAIRLKNLASLAGEQVIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR
LDSVSPLNKVPEVDAEIGGGDERNLLRRGCGSGYAEVDFVGVDGHRYRARWEVKRAREKI
DGRLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA
DDNERGTLLEKLTDTGLYSRLGQAAFEAAKEAKEGLARLEQQAGGLQPLEPEQREVLENE
HQAQLDELKALQQQLKALEAQRQWLSELQRLENEREAACQQLQDAEDERENLAEARRILD
LFEQLAPQRHRFLRLQDLGPLLEKAADSLARLQHEEQAVQQRLAELQSQCSAASEQLRSA
EQARQDAEPRLVQARREEERLQHLNADLAAIREESVQADAAASAGEATLKQLEQQQQRTA
EQLAALAQPLETSAALQPLCAAWDGYRPRLQQAVQLAVRLQQGRSELPALEAQAQAAETQ
QNVAREALDNLQRERDSDVGLAEQLARLHRQLDDWRQAERETEALRELWSQQRALEASRR
ELLDAATDQQAELDSLVPLGKQARIDRDAAEQALTVTLAVLERQRLARSENVEALRAALV
PGEPCPVCGSHEHPWQQTDALVASLARHDDSEAERARQALQQQDQRLQELRDRHIALSTQ
LRQTQQRQSEVDAQLQALAPRLLALPAHARLLEQPEAERSQWLETQLTTLKGQIASASQL
QQQLLALQQRSETLQQAWQTAREACVEATQQLARQRDALARDSLQLDEELAAFAELLPGE
QLQRWREDPAQTFMQLDASIATRLQQLQTQAELAEELRQCEQRRSDEQLQQRHRQEKQAG
CSVRLAEREKLLLACQQALRTSLGEHGSASAWQQQLDATIQAARQTQAGIDQQLNESKLG
LTRLHSEQQNCRQRHAELQQERDALNAELGAWRAAHPALDDTILAQLLQMDDALLAEARQ
RLQQNAETLTRCRERLDGCLNRLASHQQQQAEVPEAEQLQQAHAEQLHRCEQAEQRCAET
RAALLDDDKRRRQSHALLAQIDEARAEMQRWGRIAALIGSSDGGAFRKIAQAYNLDLLVQ
HANVQLRQLARRYRLKRGGSPLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSKLRIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERIPVQIQV
QRQGNGQSGLKIVGGLS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcctcgccatccgcctgaagaacctggcctctctggccggagaacaggtcatc
gatttcaccgcggaacccctggccagcgccgggctgttcgccatcaccgggcccaccggt
gccggcaagagcaccattctcgacgccctgtgcctggcgctgttcggcagcacgccgcgg
ctcgacagcgtttcgccgctgaacaaggtgcccgaggtagatgccgagatcggcggtggc
gacgagcgcaacctgctgcgccgcggctgcggcagcggctacgccgaggtcgatttcgtc
ggcgtcgacggtcaccgctaccgcgcacgctgggaggtcaagcgcgcccgcgagaagatc
gacggccgcctgcaggccagcagccagagccttacggatctcgacagcggcacgctcctg
gccagcggcaagaaacgcgaattcaaggaattgctcgaagcccgccttgggctgaccctg
gcccagttcacccgcgccgtgctgctggcgcagagcgaattttccgccttcctcaaggcc
gacgacaacgagcgcggcaccctcctggaaaagctcaccgataccggcctctacagccgc
ctcggccaggccgccttcgaggccgccaaggaggcgaaggaaggcctcgcccgtctggag
cagcaggccggcggcctgcaaccactggagcccgagcagcgcgaggttctggagaacgaa
catcaggctcagctcgacgaactgaaagcgctgcagcagcagctcaaggcgctggaagcg
cagcggcaatggctcagcgaactgcagcgcctggaaaacgagcgagaggcggcatgccag
caactgcaggatgccgaagacgagcgcgaaaacctcgccgaggcccggcgcatcctcgac
ctgttcgagcaactggcgccgcaacgccatcgtttcctgcgcctgcaggatctcggcccg
ctgctggagaaggccgccgacagcctggcgcgcctgcagcatgaggaacaggccgtgcag
cagcgcctggccgagctgcagagccaatgcagcgccgccagcgagcaactgcgttcggcc
gaacaggcgcgccaggacgccgagccgcggctcgtccaggcgcgccgtgaagaagaacgc
ctgcagcatttgaacgccgaccttgccgcgattcgcgaagaaagcgtccaggccgatgcc
gcggccagcgccggcgaggcaacgctcaaacagctcgagcagcagcaacagcgcaccgcc
gaacagctcgcggcgctggcacagccactcgaaacgagtgcagccctgcaaccactctgt
gcggcatgggacggctaccgtccgcgtctgcaacaggccgtccagctggcggtacgcttg
cagcaaggtcgcagcgaactccccgcgctggaagcgcaggcccaggccgccgaaacccag
cagaatgtggcccgcgaggcactggacaacctgcaacgcgagcgcgacagcgacgtcggg
ctggccgaacagctggcccgactgcatcgacagctcgacgactggcgccaggccgagcgc
gaaaccgaggccctgcgcgagctctggtcgcagcagcgtgcgctcgaagccagccggcgc
gaactgttggacgccgccaccgaccagcaggccgaactggacagcctggtaccgctgggc
aaacaggctcgaatcgatcgagatgcggccgagcaggcgctcacggtcacccttgccgtg
ctcgagcgccagcgtctggcgcgcagcgagaatgtcgaggcgttgcgcgcggcactggtg
cccggcgagccctgcccggtctgcggcagccacgagcatccctggcaacagaccgatgca
ctggtcgccagccttgctcggcacgatgacagcgaggccgagcgcgcgcgtcaggcatta
cagcaacaggaccagcgcctgcaggagctgcgcgatcgccatatcgcgctcagcacacag
ttgcgccagacccagcagcgccagagcgaagtcgatgcacagctgcaggccctggcgccg
cgcctgctcgctctgcccgcgcacgcacgattgcttgagcagcctgaagccgagcgttcg
caatggttggaaacgcaactgacgactctcaaaggccagatcgccagcgccagccagctt
cagcagcaactgctcgccctgcaacagcgcagcgaaaccctgcagcaagcctggcagacc
gcgcgcgaggcctgtgtcgaggcgactcaacagctcgcgcgccagcgcgatgccttggcc
cgcgacagcctacaactcgacgaggagctggcggcctttgccgaactgctgcccggcgag
caactgcagcgctggcgcgaagacccggcgcagacctttatgcagctggacgccagcatc
gccacgcgattgcagcaactgcagacgcaagccgagctggccgaggagctgcgccagtgc
gagcagcgccgcagcgacgaacagttgcaacagcgccatcgccaggagaaacaggcaggc
tgcagcgtgcggctggctgagcgcgaaaagcttctgctcgcctgccagcaggcgctgcgg
accagccttggcgagcatggcagcgccagcgcctggcaacagcagctggacgcaaccatc
caggctgcgcggcaaacccaggccgggatcgatcagcagctcaacgagagcaaacttggc
ctgacacgcctgcacagcgagcaacagaactgccgccagcgccacgccgaattgcagcag
gaacgcgatgcgctgaacgcggaactgggcgcctggcgcgccgcccatccggcgctggac
gacaccatcctcgcccagctgctgcagatggacgacgcgctgctggccgaggcgcgccag
cgcctgcagcagaacgccgaaaccctaacccgctgccgcgaacggctggatggctgcctc
aatcggctggccagccaccagcagcaacaggccgaggtgccggaagccgagcagttgcaa
caggcacatgccgaacagctgcaccgctgcgaacaggccgagcagcgctgcgccgaaacc
cgggccgcgctgctcgacgacgacaagcgccgccgccagagccacgcgctgctggcacag
atcgacgaggcgcgcgccgaaatgcagcgctgggggcgcatcgccgcgctgatcggctcg
agcgacggcggcgccttccgcaagatcgcccaggcctacaacctggatcttctggtgcag
cacgccaacgtgcagctgcgtcagctggcccgccgttatcggctcaagcgcggcggaagt
ccgctgggcctgctggtgatggataccgagatgggcgacgagctgcgctcggtgcattcg
ctgtccggcggcgagaccttcctcgtctcgctggccctggcactgggcctggcctcgatg
gcgtcgagcaagctcaggatcgaatcgctgttcatcgacgagggcttcggtagcctcgat
cccgagtcgctgcagatcgccatggacgcgctggattcgctgcaagcccagggccgcaag
gtggcagtgatcagccacgtggccgagatgcacgaacgcatcccggtgcagattcaggtg
cagcgccagggcaacgggcagagcgggctgaagatcgtcggcgggctgtcctag
DBGET
integrated database retrieval system
