Paenibacillus sabinae: PSAB_04975
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Entry
PSAB_04975 CDS
T03064
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
psab
Paenibacillus sabinae
Pathway
psab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PSAB_04975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psab03400
]
PSAB_04975
DNA repair and recombination proteins [BR:
psab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PSAB_04975
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
AHV95931
UniProt:
X4Z8A1
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All DBs
Position
complement(1141594..1142667)
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AA seq
357 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFSATEDKDVSLRYIHKACGSPLSYVRKCPVCDKEVAWEEI
GKGYEYEKGKFVIFEKDELDALTEESTKNITILDFVDLKEIDPIYFQKTYYLSPDQAGAG
AYRLLMEAMRQTGKIGVAKISIRSKSSLAAIRVLENCLSIETMFYPDEIRPVSQVPSLPE
AGAVNDKELDMAKLLISQLSTPFEPGKYTDDYRKRMLDLISSKVAGEEIRIAPARQETNV
IDLMAALQASIEAVQHIPSDPGSPATTPAAKPRKAAGGRKKSAGKAAGATAADKSGAGAG
EPAAGIAGPAAKAAGAKDAPAAGSAVPAGGAAEASSPAPVIAPKPKRRSAKNKQTVS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtttggaaaggcgccatcagcttcggacttgtgcatgtgccggtcaaaatg
ttctcggccaccgaggataaggatgtctccctgcgttacattcataaagcttgcggcagc
cctctgtcctatgtgcgcaaatgcccggtgtgcgacaaggaggtcgcctgggaggaaatc
ggcaaaggctatgagtatgagaagggcaaattcgttattttcgagaaagacgagctggac
gcgctcacggaagagagcaccaagaatattacgatcctcgactttgtagatttgaaggaa
attgacccgatttattttcaaaaaacgtattatttgtcacccgatcaggccggggcgggc
gcttaccggctgttgatggaggcgatgcgccaaaccgggaaaatcggcgtcgccaaaata
tcgatccgctccaaaagcagcctggccgcgatccgcgttctggagaactgcttatcgatc
gagacgatgttctacccggatgagatccggccggtatcccaggtgccgagtctgccggaa
gccggcgcggtgaacgataaggagctggatatggccaagctgctcatctctcagctgtcg
acgccgtttgagccgggtaaatacacggatgattaccgcaagcggatgcttgacctgatc
tccagcaaagtggccggcgaggaaatccgcattgctccggctaggcaggagacgaatgtc
atcgatctgatggccgcgctccaagcgagcattgaggccgttcagcacattccgtccgat
ccgggcagcccggcgaccacccctgccgccaaaccccgtaaagcggcgggcgggcggaag
aaatccgctgggaaagctgccggggccacggccgcagacaaaagcggagccggcgcggga
gaaccagctgcgggaatcgccgggcctgcggcgaaggccgccggagctaaggacgctccg
gcagccggaagcgctgtgccggcaggcggagcagctgaggcttcttccccggcgcctgtc
attgcgcccaagccgaagcgccgcagcgcgaagaacaagcaaacggtatcctag
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