Stutzerimonas stutzeri CCUG 29243: A458_20540
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Entry
A458_20540 CDS
T02168
Name
(GenBank) ECF subfamily RNA polymerase sigma-70 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
psc
Stutzerimonas stutzeri CCUG 29243
Brite
KEGG Orthology (KO) [BR:
psc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psc03021
]
A458_20540
Transcription machinery [BR:
psc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A458_20540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
TPR_2
TPR_21
TPR_12
TPR_8
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AFM35323
UniProt:
I4CZ16
LinkDB
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Position
complement(4422956..4424197)
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AA seq
413 aa
AA seq
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MPLTGHFTAARVEAVYRSESRRVLATLIRLLGDFDRAEEALHDAFAAALQQWPRDGVPDN
PRAWLVSAGRFKAIDALRRRARFDASLRLLAEQLEDAAQAVEVDEMEDDRLRLIFTCCHP
ALPADGRVALTLREVCDLTTEEIARAFLAPPATIAQRIVRAKAKIRDARLPYRVPERDEL
PARLESVLRVVYLVFNEGYTASAGAELTRADLCAEAIRLGRLLLELLPNAEVMGLLALML
LHDARRAARTDATGELVRLDEQDRSLWSRQQIAEGSQLVQLALTSRAFGPYSLQAAIVAV
HAEAPSAAQTDWPQIVRLYDVLLQLSPSPVVELNRAVAVAMRDGPEAGLLLVDELLGRGD
LQDYHLSHATRADLLRRLARIDEAREAYRSALRLVQLEPERRFLQRQLDELGD
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaccggacatttcacggcggcgcgggtcgaggcggtctatcgcagcgagtcg
cgccgagtgctggccacgctgatccgtctgctgggcgacttcgatcgcgccgaagaggcc
ttgcatgacgcctttgccgcggccctgcagcagtggccacgcgatggtgttccggacaat
ccgcgcgcctggctggtttccgccggccgcttcaaggccatcgatgccctgcgccgccgt
gcgcgcttcgatgcctcgctgcggctgctggccgaacaactggaagacgcggcgcaggca
gtggaggtcgatgagatggaagacgaccgtctacggctgatcttcacctgctgccacccg
gccctgccggccgatggccgcgtggcgctgaccctgcgtgaagtctgcgacctgaccacc
gaggagatcgcccgcgcctttctcgctccaccggccaccattgcccagcgcatcgtgcgc
gccaaagcgaagatccgtgacgcccggttgccgtatcgggtgcccgagcgcgacgagctg
ccggcgcggctggagagcgtgctgcgggtggtctatctggtgttcaacgagggctacacc
gcatcggccggcgccgagctgacccgcgccgacctctgtgccgaggcgattcgcctgggc
cgactgctcctcgaactgctgcccaacgccgaggtgatggggctgctggcgctgatgctg
ctgcacgatgcccgccgggctgcgcgtaccgatgctaccggtgagctggtgcggctggat
gagcaggaccgcagcctgtggagccgccagcagattgccgaaggatcgcagctggtgcag
ctggcgttgaccagtcgcgcgttcggcccctattcgttgcaggccgccatcgtcgcggtg
catgccgaggcgccgagcgccgcgcagaccgactggccgcagatcgtgcggctctacgat
gtgctgctgcagttgagcccgtcgccggtggtggaactgaaccgcgcggtggccgtggcc
atgcgcgacgggcccgaggccggcctgctgttggtggatgaactcctcgggcgcggcgat
ctgcaggactaccacctcagccacgccacccgcgccgatttgttgcgccggctggcgcgt
atcgacgaggctcgcgaggcctatcgcagcgcgctgcgcctggtgcagctggagcccgaa
aggcgtttcctgcagcggcagctggatgagttgggcgactga
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