Pseudoxanthomonas spadix: DSC_00625
Help
Entry
DSC_00625 CDS
T01643
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
psd
Pseudoxanthomonas spadix
Pathway
psd00540
Lipopolysaccharide biosynthesis
psd01100
Metabolic pathways
psd01250
Biosynthesis of nucleotide sugars
Module
psd_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
psd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DSC_00625
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psd01005
]
DSC_00625
Enzymes [BR:
psd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DSC_00625
Lipopolysaccharide biosynthesis proteins [BR:
psd01005
]
Lipid A
DSC_00625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
GFO_IDH_MocA
DUF362
Motif
Other DBs
NCBI-ProteinID:
AER54778
UniProt:
G7USA9
LinkDB
All DBs
Position
complement(3362500..3363366)
Genome browser
AA seq
288 aa
AA seq
DB search
MPLSAHCVPVAIDDRVSIANDAPFVLFGGLNVLEDLDSTLFAAEHFKRVTDRLGIPYVFK
ASFDKANRSSISSYRGVGLEQGLRIFEQVKQQLDIAVITDVHEVAQAAPVAEVVDVLQIP
AFLARQTDLVVAIARTGRAVNIKKPQFMSPTQIRHVVDKIREAGNDRIILCERGAQFGYD
NLVVDMLGFREMTESSGGLPVIFDVTHSLQRRDPGSEASGGRRRQVPELARAGMAVGLGG
LFLEAHPDPDHARCDGPSALPLAALEAFLAQIKAIDDLVKGLPALDIA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtccgcccactgcgtcccggtcgcgatcgatgaccgggtgtccatcgccaac
gatgcgccgtttgtgctgtttggcgggctcaacgtgctcgaagacctggattcgaccctg
tttgccgccgagcacttcaagcgggtgaccgacaggctgggcatcccgtatgtgttcaag
gcctccttcgacaaggccaaccgctcctcgatcagctcctatcgcggcgtcggcctggag
cagggcctgcggatcttcgagcaggtcaagcagcagctggacattgcggtgatcaccgac
gtgcacgaggtggcccaggccgcgccggtggccgaggtggtggacgtgctgcagatcccg
gcgttcctggcacggcagaccgatctggtggtggccatcgcccgcaccgggcgcgcggtg
aacatcaagaagccgcagttcatgagccccacccagatccggcacgtcgtcgacaagatc
cgcgaggccggcaacgaccgcatcatcctgtgcgagcgtggcgcgcagttcggctacgac
aacctggtggtggacatgctgggctttcgcgaaatgaccgagtccagcggcggcctgccg
gtgatcttcgatgtcacccacagcctgcagcggcgcgatccgggcagcgaagcctcgggc
gggcgccgccgccaggtgccggagctggcccgtgctggcatggcggtgggactgggcggg
ctgttcctggaggcgcatccggacccggaccacgcccgttgcgacggccccagcgccttg
ccgctggccgcgctggaggccttccttgcgcagatcaaggcgatcgatgacctggtcaag
ggcttgccggcgctggacatcgcctga
DBGET
integrated database retrieval system
