Pseudoxanthomonas spadix: DSC_15090
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Entry
DSC_15090 CDS
T01643
Name
(GenBank) PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Organism
psd
Pseudoxanthomonas spadix
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dCache_1
PAS_3
PAS
PAS_9
PAS_8
TPP_enzyme_M_2
Motif
Other DBs
NCBI-ProteinID:
AER57662
UniProt:
G7UW04
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All DBs
Position
complement(3080579..3083569)
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AA seq
996 aa
AA seq
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MERPDSRHHPLQPVVQARTVLGFGLLLALALAIGLGYWVVSDRRHRLDAAERQSQALAAG
VGRVINLELRNIERAMHGIAGDAQQLLETVPEQASALISESIAGVVSRHREIHSIVLVAA
NGVALTDGPGEPGFGDWIGRAPHGPDTRLQFGPAYALADGRWVLPLALAMPAGRGAGQRW
ILARLLTDELQSMTAGLDSGRDGVVSVIGPGNILLARSLDGTARPELVGRQVAVPSPQEL
RQRPEVAQHASQVDGLRRVVAGHALVHYPLQAWAGLSTRQVLLPWYRFVAIAVMLYLLYW
ALLLVMLRAVGRVDRAQRDILEQLQRNTEHLRLAQYTGKVGAWAMEQHTRELVWGGDISA
MFGLGQAHSSSLRLFGRHVHPHDRRMLARRFASAWRSHSAFSSEFRLVADDGTERWVVGR
GGVVQDQAGRQRMTGTLVDISERMEAMSRVSDAERQFRLIFDRNPLPFWVHDAHSLRFLE
VNRAATVQYGFSREELLTMELGDLCPGGLPDASGLVEDPAAGFDAAHVSQHRRKDGSTLQ
VRVYGSEIRFGGRDARLVLAEDVSERLEYEKELAYRARHDQTTGLINVQTLSDRLDQGQH
PGYQVVYLQLRGLQPIRDSLGRETADDVLRTLAARLQQWADDFGLAAHQPDEDFVLAILH
PQRSSAALEAAIEAVREPIGQGDGAMQRLDARFGLAQDDGSGQRAERIIDNAALAAHALE
TAAFEISRYDGALARRYSERLRMAARLRAAIEQDEFELHFQPILRLADGSVAALEALVRW
PQRDGTYIPPGDFIPLCEDTGLIVPLGNWILRRAAQAQAWLQRQGCQDLPVAVNVSAIQM
LQGDLPGELEAACLQAGIAPHALHMELTESVVMNRPEQGMAAMQRLREAGVCISLDDFGT
GFSSMSYLRHLPLSSIKLDRAFICDVDRDERNASICSALLMLGHSLGLVMIAEGVERPEE
LEWLRRHGCDQVQGFLLGRPQPLESALLRVRGVASH
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggaacgacccgattcacgccatcaccccctccagccggtcgtgcaggcccgcacggtg
ctgggctttggcctgttgctggccctggccctggccatcggcctgggctactgggtggtc
agcgaccgtcgccaccgcctggacgctgccgagcgccagagccaggcgctggcggccggc
gtggggcgggtgatcaacctcgaactgcgcaacatcgaacgcgccatgcacggcattgcc
ggcgatgcgcagcagctgctggagaccgtgcctgagcaggcatcggcgctgatttccgaa
tccatcgccggggtcgtctcgcgccatcgtgaaatccacagcatcgtgctggtcgccgcc
aacggcgtggcactgaccgatgggccgggcgagccgggcttcggcgactggatcgggcgg
gccccgcacggaccggacacgcgcctgcagttcgggcccgcgtacgccctggccgacggc
cgctgggtgctgccgctggccctggccatgcccgccggccgtggcgccgggcagcgctgg
atcctggcccgtctccttaccgatgagctgcagtccatgaccgctggcctggacagcggg
cgcgatggggtggttagcgtcattggccccggcaacatcctgctggcgcgcagcctggac
gggactgccaggcccgaactggtcggccgccaggtggccgtgccttcgccgcaggaactg
cgccagcggccggaagttgcccagcacgccagccaggtcgatggcctgcgccgagtggtg
gccggccatgcgctggtccactatccgctccaggcctgggcgggcctgtcgacccgccag
gtcctgctgccgtggtaccggttcgtggccatcgcagtgatgctctacctgctctactgg
gcgctgctgctggtgatgctgcgtgccgtcggccgtgtcgaccgtgctcagcgcgacatc
ctggaacagctgcagcgcaataccgaacacctgcgcctggcccagtacaccggcaaggtc
ggtgcctgggcaatggagcagcacacccgcgaactggtctggggtggggacatcagcgcc
atgttcggcctgggccaggcgcacagttcctcgctgcggctgttcggccgccacgtgcac
ccccacgaccgcaggatgctggcgcgccgttttgccagtgcctggcgaagtcacagcgcg
ttctccagcgagttccgcctggtggccgacgatggcaccgagcgctgggtggtcggacgc
ggcggcgtggtccaggaccaggccggacgccagcgcatgaccggcaccctggtggacatc
agcgagcgcatggaagccatgtcgcgggtgagcgatgccgaacgccagtttcgcctgatc
ttcgaccgcaacccgttgccgttctgggtgcatgacgcgcacagcctgcgcttccttgag
gtcaaccgtgccgccaccgtgcagtacggcttcagccgcgaggaattgctgaccatggag
ctgggtgacctctgcccgggcggcttgcccgacgccagtggcctggtggaagacccggca
gccggtttcgacgccgcgcacgtgtcccagcaccggcgcaaggatggctcgaccctgcag
gtgcgcgtgtatggcagcgagattcgtttcggcggccgcgacgccaggctggtgctggcc
gaggacgtctccgagcgcctggagtacgagaaggaactggcctatcgcgcgcgccacgac
cagaccaccggcctgatcaacgtgcagaccctgagcgatcgcctggaccagggccagcat
ccgggctaccaggtcgtgtacctgcagctgcgcgggctgcagccgatccgcgattcgctg
ggacgggagaccgccgacgacgtgctgcgcacgctggccgcgcgcctgcagcagtgggcc
gacgacttcggcctggccgcgcaccagcccgacgaggacttcgtcctggccatcctgcat
ccgcagcgctccagcgccgcgctggaggcagcgatcgaagcggtgcgcgagccgatcggc
cagggcgatggcgcgatgcagcgcctggacgcgcgcttcggcctggcccaggacgatggc
agtggccagcgcgccgagcgcatcatcgacaacgccgccctggccgcccacgcgctggaa
acggcggctttcgagatctcgcgctacgacggcgccctggcgcgccgctacagtgagcgc
ctgcgcatggccgcgcgcctgcgtgcggcgatcgagcaagacgaattcgagctgcacttc
cagcccatcctgcgcctggccgacggcagcgtggccgcattggaggcgttggtgcgctgg
ccgcagcgagacggcacctacatcccgcccggcgacttcatcccgctgtgcgaggacacc
ggcctgatcgtgccgctgggcaactggatcctgcgccgcgctgcgcaggcgcaggcgtgg
ctgcagcgccagggctgccaggacctgccggtggcggtgaacgtttcggcgatccagatg
ctgcagggcgacctgccaggcgaactggaagcggcctgtctgcaggccggcatcgcccca
catgcgctgcacatggagttgaccgaaagcgtggtgatgaaccgccccgagcagggcatg
gccgcgatgcagcgcctgcgcgaagcaggcgtgtgcatctcgctggacgatttcggcacc
ggcttttcgtcgatgtcctacctgcgccacctgccgctgagttcgatcaagctcgatcgt
gccttcatatgcgacgtcgaccgcgacgagcgcaacgccagcatctgcagcgcgctgctg
atgctgggccacagcctgggactggtgatgatcgccgagggcgtggagcggccggaggag
ctggaatggctgcgccgccatggttgcgatcaggtgcagggcttcctgctgggccgcccg
cagccgctggaatcggccttgctgcgcgtgcgaggcgtggcctcgcactga
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