Pseudomonas sp. CCOS 191: CCOS191_3354
Help
Entry
CCOS191_3354 CDS
T03967
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psec
Pseudomonas sp. CCOS 191
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psec03032
]
CCOS191_3354
03400 DNA repair and recombination proteins [BR:
psec03400
]
CCOS191_3354
Enzymes [BR:
psec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCOS191_3354
DNA replication proteins [BR:
psec03032
]
Prokaryotic type
DNA Topoisomerases
CCOS191_3354
DNA repair and recombination proteins [BR:
psec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCOS191_3354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CRI57890
UniProt:
A0A0F7Y055
LinkDB
All DBs
Position
I:3822929..3823951
Genome browser
AA seq
340 aa
AA seq
DB search
MPDCPLPAALHYVDDSQPGLTRRRWRDRFHYFDAGNQRVRDKETLARIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHTQWRELRDQHKYARMLAFAEVLPRLRKQLDTHLA
CPGLGREKVMALVISLLDTTLIRIGNRQYLRDNRSYGLTTLDTRHVQVKGSRIRFQFRGK
RGVEHNVTLTDRRLAGLVKRCMELPGQSLFQYLDEQGQRHGIGSTEVNQFLQQLTGADFT
AKDYRTWAGSSLALSLLRPQAWEPDSEARRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL
EHFHLGRLSALPRARPRRGLETEEVALLRFLQMLERQDDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactgcccgttgcctgccgccctgcattatgtcgatgacagccagcccggcctg
acccgccggcgctggcgcgaccgcttccactacttcgacgccggcaaccagcgggtgcgc
gataaggagaccctggcgcgcatcgccgccctggtgatcccaccggcctacaccgacgtg
tggatctgcgccgacccgcaagggcacctgcaggccaccgggcgcgacgcccgggggcgc
aagcagtaccgctaccacacgcaatggcgcgagctgcgcgaccagcacaagtacgcgcgc
atgctggccttcgccgaggtgctgccgaggctgcgcaagcaactggacacgcacctggcc
tgccccgggcttggccgggagaaggtcatggcgctggtgatcagcctgctcgacaccacg
ctgatccgcatcggcaaccgccagtacctgcgcgacaaccgctcctacgggctgaccacc
ctcgatacccgccatgtgcaggtcaagggcagccgtatccgcttccagttccgcggcaag
cgcggcgtcgaacacaatgtcaccctgaccgaccggcgcctggccggcctggtcaagcgc
tgcatggaactgcccggccagagcttgttccagtacctggacgaacaggggcaacgccat
ggcatcggctcgaccgaggtcaaccagttcctccagcagctgaccggcgccgacttcacc
gccaaggactaccgcacctgggccggcagcagcctggcgctgagcctgctcaggccgcag
gcctgggagcccgacagcgaggcgcgccggcaggtcgccgccatcgtccgccaggtggcg
acgcgcctgggcaacacaccggcagtgtgccgacgctgctacatccatcccgcagtgctc
gagcacttccaccttggccggctttcggcattgccccgtgcacgtccgcgcaggggcctg
gaaaccgaggaagtggcactgctgcgtttcctgcagatgctggagcgccaagacgatcat
tga
DBGET
integrated database retrieval system
