Pseudomonas sp. TCU-HL1: THL1_1941
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Entry
THL1_1941 CDS
T05373
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset03030
DNA replication
pset03430
Mismatch repair
pset03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THL1_1941
03430 Mismatch repair
THL1_1941
03440 Homologous recombination
THL1_1941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pset03032
]
THL1_1941
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_1941
Enzymes [BR:
pset01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THL1_1941
DNA replication proteins [BR:
pset03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THL1_1941
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THL1_1941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_18
AAA_14
AAA_30
AAA_19
AAA_2
nSTAND3
PIF1
TsaE
AAA_7
Rad17
SKI
DUF3646
AAA_24
zf-CXXC
Herpes_Helicase
Mg_chelatase
HasA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AOE84489
UniProt:
A0A1B3E4M1
LinkDB
All DBs
Position
2080128..2082302
Genome browser
AA seq
724 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARILAK
CLNCETGISSTPCGQCSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPSRGRY
KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLTHVLGAENVPFENDALWLLGRAADGSMRDAMSLTDQAIAFGDGKVLAADVRAM
LGTLDHGQVYGVLHALLQGDARALLDAVSHLAEQGPDWNGVLSEMLNVLHRVAIAQVLPD
AVDNGQGDRDRVLALAQALPGEDVQFYYQMGLIGRRDLPLAPDPRSGFEMVLLRMLAFRP
ADAEGAPKVVLKDPGISQATTDPQTNPVAGAALPAPVAVSTPAPVPVQSSAPVVVPTPVV
NQPVAAPAPAPAPAPVPAPVVDVPASVPVVEAPVVVPAVAEAPTAPVAAPVPEPTPEPVV
AQEPDPVAEAPAVAEVVDLPWEEPSVAVAESPVVEAQPEPERVVEPAPPAAEPVATPQPQ
PAAVVAADESDDEPPPGDYDEYYEADAGSIAYLDDLGPTPATVAEPEVLPAAQPATGLAA
EWLDLFPRLGLSGMTGNIGANCTLVAVDGDVWRLHLDPAQSALFNANQQRRLNDALNQYH
GRNLKLEVDVIRPEQETPAQAAARKRAARQHQAEEAIASDPLVLKMIELFGAQVRADTIE
PLDR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgaaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctgaaagccttgatcaatgccctggacaaccagcgcctgcaccacgcc
tacctgttcaccggtacgcgcggcgtgggcaagaccaccatcgcgcgcatcctggccaag
tgcctgaactgtgaaacgggtatcagctccaccccctgcggccagtgctcggtctgccgg
gagatcgatgaaggtcgcttcgtcgacctgatcgaagtggacgccgccagtcgcaccaag
gtggaagacacccgcgaactgctcgacaacgtgcagtacgcccccagccgcggtcgttac
aaggtctacctgatcgacgaagtgcacatgctctccacgcactcgttcaacgccctgctc
aagacccttgaagagccgccgccccacgtcaagttcctgctggccaccaccgacccgcag
aagttgcccgtcactatcctctcgcgctgcctgcagttctccctgaagaacatgccgccg
gagcgggtggtcgagcacctgacccatgtgctcggtgcggaaaacgtaccgttcgaaaat
gacgcgctctggctgctcggccgtgccgccgacggctccatgcgtgatgccatgagcctt
accgaccaggccattgccttcggtgatggcaaggtgctcgcggctgatgtgcgcgccatg
ctcgggaccctcgatcatggccaggtctacggtgtactccatgcgctgctgcagggtgat
gcccgggcgctgctggatgccgtgagccacctggccgagcaagggccggactggaatggc
gtgctctccgaaatgctcaatgtgttgcaccgcgtggcgattgcccaggtgctgccggac
gccgtcgacaatggccagggcgaccgtgatcgcgtgctggcgctggcccaggcgctgcct
ggcgaagacgtgcagttctactaccagatgggcctgatcggccgtcgcgaccttcccttg
gcgccggacccgcgcagtggcttcgagatggtgctgttgcgcatgctggcgttccgcccg
gccgacgccgagggcgcaccaaaggtggttctaaaggacccggggatcagccaggccacg
actgatccccagaccaacccagtggccggagctgctttgccggctccggttgccgtttcc
actccggcacccgtacccgtacagtcctctgcaccggtcgttgtgccgacgcctgtggtc
aatcaacctgttgcggctccggctccggctccggctccggctccggttccggctccggtc
gtcgatgtgcctgcctcggtacctgtcgtcgaggccccggtagtcgtacctgcagtggca
gaggcaccgacggcgccagtcgcagcgcccgtgcctgaacccactcctgaacctgtggtg
gcgcaagagcccgatcctgtggccgaggcgccggctgtagccgaagtggtcgatctgccg
tgggaggagccgtctgttgcggtggcggagtctccggtagtcgaggcgcagcctgagcct
gagcgggttgtcgagcccgcgccgcctgcggccgaaccagttgcgacgcctcagccacag
cccgcagcggttgtcgccgctgacgagagcgacgatgagccgccgcccggtgactacgac
gaatactacgaggctgatgccggcagcatcgcgtatctggatgatctcggcccgactccg
gcgaccgtcgccgagcctgaagtcctgcctgctgcgcagccggcgaccggcctggccgcc
gaatggctggacctgttcccgcgccttggcctgtcgggcatgacgggcaacatcggcgcc
aattgcaccctggtggcggttgacggcgacgtttggcgcctgcatctggatccggcgcag
agcgcgctgttcaacgccaaccagcagcgtcgcctgaatgacgcgctgaaccagtaccac
gggcgtaatctgaaacttgaggtcgacgtcatacgccctgagcaggaaactccggcgcaa
gcggctgcccgcaagcgtgccgctcgtcagcatcaggccgaagaagccattgccagcgat
ccgctggtgctgaaaatgatcgaactgttcggcgctcaggtgcgtgccgacaccattgaa
ccccttgaccgctga
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