Pseudomonas sp. TCU-HL1: THL1_215
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Entry
THL1_215 CDS
T05373
Name
(GenBank) amino acid dehydrogenase
KO
K26064
D-lysine oxidase
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset00310
Lysine degradation
pset01100
Metabolic pathways
pset01120
Microbial metabolism in diverse environments
Module
pset_M00960
Lysine degradation, bacteria, L-lysine => D-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
THL1_215
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Gene cluster
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Motif
Pfam:
DAO
FAD_binding_2
NAD_binding_8
FAD_binding_3
ApbA
Pyr_redox_2
Pyr_redox
FAD_oxidored
UDPG_MGDP_dh_N
MurD-like_N
HI0933_like
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AOE82763
UniProt:
A0A1B3DZP4
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Position
235574..236815
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AA seq
413 aa
AA seq
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MDCDILVLGAGIVGVSTALHLQARGRDVCLVDRAEPGSGTSHGNAGLIERSSVVPYAFPR
NFAALLRYGLNQQPDVRYSPSYLPKLAPWLASYWHHSAARRLEEASRAMLPLVERCVEEH
DQLVAEAGLGHLIRAQGWLDVYRSRAALDQAAAEARALDRFGLRFDVMDGATLRQREPHL
GSVAAGGIHWHDPKTVLDPGALVRGYAELFVRRGGRVLQGDAATLRQQAGGWSVCAAGRE
LQAREAVVALGPQSGALFRDLGYRIPLALKRGYHMHYAAAEGAELCHSVCDAQSGYVLAP
MARGIRLTTGIEFAHPDDPANEIQLRRAERLARELFPLGRRLDAEPWLGRRPCLPDMRPV
IGAAPQHPGLWFNFGHAHHGLTLGPVSGRLLAELMTGAQPFTDPTPYSAQRFR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggactgcgacatccttgtcctgggcgccggcatcgtcggcgtctccactgcccttcac
ctccaggcgcgcggccgtgacgtgtgcctggtggaccgtgccgagccgggctccggcacc
agccacggcaacgccggcctgatcgagcgttccagcgtggtgccctacgccttcccgcgg
aatttcgcggcgctgctgcgctacggcctgaaccagcagccggacgtacgctacagcccg
agctacctgcccaagctcgcgccctggctggcgtcctactggcaccattccgcggcccgc
cgactggaagaggcctcgcgcgccatgctgccgctggtggagcgctgcgtggaggagcac
gaccaactggtggcggaggctggtcttggccacctgatccgcgcgcagggctggttggac
gtctaccgcagtcgcgcggcccttgatcaggcggctgccgaggcccgtgcgctcgaccgc
ttcggcctgcgtttcgatgtgatggacggcgccaccctgcgccagcgcgagccgcacctg
ggttcggtcgccgccggtggcatccactggcatgacccgaagacggtgcttgaccccggc
gccctggtgcgcggctacgccgaactcttcgtgcggcgtggcggccgcgtgctgcagggc
gatgccgcgaccctgcgtcagcaggccggtggctggagcgtgtgcgccgctggccgtgaa
ctgcaggctcgcgaggcggtggtggcgctggggccgcaatcgggcgcgctgttccgtgac
ctgggctaccgcatcccgctggcgctcaagcgcggctaccacatgcactacgcggcagcc
gaaggcgccgagctctgccactcggtctgcgacgcccagagcggctacgtgctggcgccc
atggcgcgcggcatccgcctgaccaccggcatcgagttcgcccacccggacgatccggcc
aacgagatccagctgcgccgtgccgaacgcctggcccgcgagctgttccccctcggacgt
cgcctggacgccgaaccctggctgggccgccgtccctgcctgccggacatgcgcccggtg
atcggcgctgcgccgcagcatccgggcctctggttcaacttcggtcatgcccaccacggc
ctgaccctggggccggtcagcggccgcctgctggcggagctgatgaccggcgcccaaccc
ttcaccgacccgactccctacagcgcccagcgtttccgctga
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