Plesiomonas shigelloides: SAMEA2665130_0972
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Entry
SAMEA2665130_0972 CDS
T04378
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00250
Alanine, aspartate and glutamate metabolism
pshi00310
Lysine degradation
pshi00350
Tyrosine metabolism
pshi00650
Butanoate metabolism
pshi00760
Nicotinate and nicotinamide metabolism
pshi01100
Metabolic pathways
pshi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAMEA2665130_0972 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAMEA2665130_0972 (gabD)
00310 Lysine degradation
SAMEA2665130_0972 (gabD)
00350 Tyrosine metabolism
SAMEA2665130_0972 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SAMEA2665130_0972 (gabD)
Enzymes [BR:
pshi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SAMEA2665130_0972 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SAMEA2665130_0972 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SAMEA2665130_0972 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
SBT60507
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Position
1:1086681..1088282
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AA seq
533 aa
AA seq
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MCDTGHVGRGNRRQPQQKNPSALIFPYNRTLQQRYLCERLIFYYTNYYFQPEEQWGDNVM
NNLLKESHFIGGQWIASENTYPVFNPATEEVRARVAFAGAAEAAQALTAAEQALPAWKKL
PAAQRSEILYRWYQLMLDNSEALAVLMSEEQGKSLQEARGEVRYAASFLQWFAEEAKRVY
GDIIPSVQADTRICVVKQPIGVVAAITPWNFPLAMITRKAGAALAAGCTLLVKPSEETPQ
CALALAVLAQQAGVPDGVLNMISGDARAIGEVWLSSSQVRKISFTGSTAVGKMLMQKSAP
TLKKCSLELGGNAPFIVFDDADIDAAVEGAVAAKFRNAGQTCVCVNRFFVHDTVYEAFTS
RLAEAVSRLRVGNGLDPHTEIGPLINADAVAKVSAHVTDALAQGAVLRCGGKALGGNFFA
PTVLSEMQDSMLIAQEETFGPIAACFRFHHDDEVIVRANNTLSGLAGYAYTQNMKRIWRL
VDELEVGMLGINRGIISTEVAPFGGVKESGQGREGSKYGLEDYLETKYVLLGM
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgatacagggcatgttgggcggggtaacaggcggcagccgcagcagaaaaatcca
tcggcactcatcttcccttacaacagaactcttcaacagcgctatctctgcgaacgccta
atcttttattatacaaattattattttcagccagaagaacaatggggcgataacgtgatg
aataacctgctaaaagaatcccattttatcggtgggcagtggattgcttccgaaaatacc
tatccggtgtttaatcctgcaactgaagaggtgcgcgcacgggttgcgtttgcgggcgca
gccgaagccgcccaagcgctgaccgccgcggagcaggcgttaccggcgtggaaaaagttg
cctgctgctcagcgtagcgagattttgtatcgttggtatcagctgatgctggataacagc
gaagcactggcggtgttgatgagtgaagagcagggcaagagcctgcaagaagctaggggc
gaagtgcgttatgcggccagtttcctgcagtggtttgccgaagaagccaagcgagtgtac
ggggatattattccttcggtgcaggccgatacccgtatctgtgtggtcaaacagccgatt
ggtgttgtcgccgctattacgccgtggaatttcccgctggcgatgatcacccgtaaagcc
ggtgctgcgctggccgccggttgtactttgctggttaagccgtctgaagaaacgccgcag
tgtgcgctggcgctggccgtactggcgcagcaagctggcgtgcccgatggcgtgctgaat
atgatctccggcgatgcgcgcgccattggcgaggtgtggttgtcatcctcacaagtgcgg
aagatttccttcactggctccaccgcagtgggcaagatgctgatgcaaaaatccgcgccg
accttgaaaaaatgttcgctggagctgggcggtaacgcgccgtttatcgtatttgacgat
gcggatattgatgcggcagtggaaggggcggtggccgccaagtttcgtaatgccggccag
acttgcgtgtgcgtgaaccgcttttttgtccacgatacggtgtatgaggcgtttacctca
cgtttggcggaagcggtgagccgcttgcgggtaggtaatggtttagacccgcacaccgag
attggcccgttgattaatgccgatgcggtagccaaagtcagcgcgcacgtaactgatgcg
ctggcgcagggcgcggtgctgcgctgtggcggcaaagcgctgggcggcaatttctttgct
cctaccgtattaagtgagatgcaagacagtatgctgattgcgcaagaagagacgtttggg
ccgattgccgcctgtttccgcttccatcatgacgatgaagtgattgtgcgtgccaataac
accctgagcggtttggccggttacgcctacacccagaatatgaagcggatctggcgtttg
gttgacgagctggaagtgggcatgctgggcattaatcgtggcatcatctcaacggaagtg
gcgccgtttggtggggtgaaagagtccggacaaggccgcgaaggctcgaaatacggttta
gaggattatctggaaaccaaatacgtgctgctgggaatgtga
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