Plesiomonas shigelloides: SAMEA2665130_2104
Help
Entry
SAMEA2665130_2104 CDS
T04378
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshi03032
]
SAMEA2665130_2104 (topB)
Enzymes [BR:
pshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SAMEA2665130_2104 (topB)
DNA replication proteins [BR:
pshi03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA2665130_2104 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
FYRC
Motif
Other DBs
NCBI-ProteinID:
SBT61601
LinkDB
All DBs
Position
1:complement(2321088..2323139)
Genome browser
AA seq
683 aa
AA seq
DB search
MRLFIAEKPSLGRAIADVLPKPHRKQDGYIECGEGNVVSWCIGHLLEQAPPDAYGEQYAR
WNLAHLPIVPQKWQLLPKASSRKQLNVLKALVKKASDIVHAGDPDREGQLLVDEVLEYLA
LPQEQMQRIQRCLINDLNPSAVTRAIGRLRSNREFIPLCVSALARARADWLYGMNMTRAY
TLLGQRAGYQGVLSVGRVQTPILGLVVRRDEEIEHFVPRPYYEVRAHIITPAEETFTAQW
QPSEATEPYQDEDGRIISQKLAEHVAQKISGQPAIVDEYEDKREKELPPLPYSLSALQID
AAKAFGMSAQQVLDVCQKLYETHKLITYPRSDSRHLPTEHFADRHSVLGAMEVHAPSLKI
DGAGFDPSRRGRCWDDSKVDAHHAIIPTSRNKPASLSSDEHKIYTLVARQYLMQFCADAE
YRKCRIRLLIDGGRFQAQARNLQIAGWKTLIGKQDDDGDEESSAPLPQVSKNDELLCQRG
EVLSKETQPPRPFTDATLLSAMTGIARFVQDKELKKVLRATDGLGTEATRAGIIELLFKR
QFLHKKGRVINSTPAGRALIHSLPDVATRPDMTAHWESKLTAISEKQCRYSDFMQPLEQQ
LYAMIEQVRHASPPAAMRVLASVSAASSAGKRQTTASRRTSRTSTSQHSASAADTDKSDK
AITSAAAKKESVKRPRKRREPKQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttttcattgcagagaaaccgagtctcggtcgggcaattgcggatgtgctgccc
aagccgcaccgtaagcaggatggttacattgagtgcggcgagggcaatgtggtcagctgg
tgtatcggtcacctgctggagcaagctccgccagatgcctatggcgagcagtacgcgcgc
tggaatctggcgcatctgccgattgtgccgcaaaaatggcaactgttgccgaaagcctcg
tcgcgcaagcagctcaatgtgcttaaggctctggtcaaaaaggccagtgatatcgtgcat
gctggtgacccggaccgcgaagggcaactactggtggatgaggtgctggaatatctggcg
ttgccgcaagagcagatgcagcgcatccaacgctgcttgattaacgacctcaacccgtcg
gccgtgacgcgtgcgattggccgtttgcgctctaaccgcgagtttattccgctgtgcgtt
tccgcactggcacgcgcgcgggccgattggctgtacggcatgaacatgacccgcgcctat
accctgctgggccagcgcgccggttaccaaggcgtgttgtcggttggtcgagtgcaaacc
cccatcttaggcttggtggtgcgccgtgatgaagagatagagcattttgtcccgcgtccg
tactatgaagtgcgggcgcacattattacgccggccgaggaaacttttaccgcgcagtgg
cagcctagtgaagccactgagccgtatcaagatgaagacggccggatcatcagccagaaa
ttggctgagcatgtggcgcagaaaattagtggccaaccggcgattgtggatgagtatgaa
gacaagcgggaaaaagagctgccgccgttaccatactcattgtcggcgttgcagattgat
gcggccaaagcgtttggcatgagcgcccagcaggtgctggatgtctgccaaaaactgtat
gaaacccacaaactgatcacctatccacgttctgatagccgccacttaccgaccgagcat
tttgccgatcggcatagcgtattgggggcgatggaagtgcatgcgccaagtctgaaaatc
gatggcgccggttttgacccatcgcgccgagggcgttgctgggatgacagcaaagtggat
gcgcaccatgcgattatcccgacttcgcgtaacaaaccggcgtccttaagctcggatgag
cataaaatctacacgctggtggcacgtcagtatctcatgcagttttgcgccgatgcagaa
tatcgcaaatgccggatccggttattgattgatggcggccgctttcaagcgcaggcgcgt
aacttgcaaattgctggttggaagaccttgattggcaagcaagatgacgacggagatgaa
gagagcagcgcgccattgccgcaggtgagcaaaaacgatgagctactgtgtcagcgtggt
gaagtgctgagcaaagaaacgcagccgccgcgtccgtttaccgatgctaccttgctctcg
gccatgaccgggattgcccgttttgtgcaggataaagagctgaaaaaagtgctgcgcgct
accgatggcttgggtacggaagcgacccgcgcagggatcatcgagctgctgtttaagcgt
cagtttctgcataaaaaagggcgggtgatcaactccacccctgccggacgggcgctgatc
cacagtctaccggatgttgccacgcggccagatatgacggcgcactgggaatcgaagctc
actgccatcagtgagaaacagtgccgctacagcgattttatgcagccacttgagcagcaa
ctgtatgccatgattgaacaggtgcgtcatgcctctccaccggcagcgatgcgggtcttg
gcctcggtgtctgcagcgtcatcggccgggaaacgccagaccaccgctagtcggcgcacc
agtcgcacgagtacgagtcaacattctgcctcggcggccgataccgataagagtgataag
gcgataacgagcgccgcagcgaaaaaagagagcgttaagcgtcctcgtaagcgtcgggag
cccaaacaataa
DBGET
integrated database retrieval system
