Pirellula staleyi: Psta_3275
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Entry
Psta_3275 CDS
T01147
Name
(GenBank) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
psl
Pirellula staleyi
Pathway
psl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Psta_3275
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psl01007
]
Psta_3275
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psl03016
]
Psta_3275
Enzymes [BR:
psl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Psta_3275
Amino acid related enzymes [BR:
psl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Psta_3275
Transfer RNA biogenesis [BR:
psl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Psta_3275
Prokaryotic type
Other AARSs
Psta_3275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ADB17939
UniProt:
D2QX99
LinkDB
All DBs
Position
4242692..4246069
Genome browser
AA seq
1125 aa
AA seq
DB search
MFNSVPASAPFPKLEQEVLQFWRENKIYDESLERRKDAERFVFFEGPPTANGMPHPGHCL
TRSIKDLFPRYQTMRGKLCERKAGWDTHGLPVEVEVCKEMGIHSKEEIEAFGIEPFIHRC
QASVWRYMQQWEKLTERLGFWIKLDQAYVTYHQSFVESVWWSLKQLFDNGLLYQGHKIVW
WWAQGGTALSSGEVGQGYREVADPSVYVLFPLLDDAGNPEGTSLLVWTTTPWTLPSNQFA
AVHPDLDYVVARDTETDQRIILAAALVETIAAKSKRPLEVVKTLKGSELLGRRYVPPYSY
YYSQLGSTTGKLVAGGEASIAWRVVAADFVTTDSGSGVVHQAPAFGEVDFDVLVAEKAKF
VVGEGPELICAVGPDGKFTAEAPTYQGRWVKDCDKEIQRELKAAGLLYHQEQYLHDYPFC
WRADNDPLIQYPRRSWFIRTTKFRDEMLASNEKINWLPGHIKEGRFGNFLESNVDWALSR
ERFWGTPLPIWVCETTGQMQAIASYAELEQKPGASGFEAWANAKQANPELVEDLKVHKPY
IDNITYDSPFATGAKMRRVSEVIDCWYDSGAMPFAQWGYPHKGAADFQQQFPADFISEAI
DQTRGWFYSQLAISTMLFGKGGVSGEAQPREYPHPFKNCIVLGLMLGEDGQKMSKSKRNY
REPNEIFDKYGADALRWYFFANQAPWTSIRYKEQSIKDSIPEFLLRLWNCYSFFVIYANI
DGFDPSKLLADVGDGQLDAATLAKAKHYRPIAERGELDRWIMGELHKTSADVTRLMDQYD
NFEACKLLNAFVDGLSNWFVRRSRERFWAADKTSPEKLDAYWTLYECLLTTAKLIAPFTP
FLAETLWQNLARSVSSDVLKSVHLCDFPEGNAANVDSLLSERMKLLREIASLGLSARMAN
KLKVRQPLSRVEVILSNATHQAWLTEHDELLRDELNVKTIDYATKADEYITYQVQPNFKR
LGPKIGKLLPACKAALGNADGATLLAQLQATGKVVLTLGGETLELDNEDIQVRLQAKEGW
AAAQGSGCVVVLSTELTPALIREGYARDLVRLIQDRRKELGLDYSDRIEVGVVSNSEELA
SAVLEHASFIASETLATHVGTSALDCEAVETELGEIPISLYVRKV
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacagtgttcccgctagtgcgccgtttccaaaactcgaacaagaggttctgcag
ttctggcgggaaaacaagatttacgacgagtcgctcgagcgccgcaaagatgccgagcgt
tttgtcttcttcgaagggccgccgacagccaacggcatgccgcacccagggcactgcctg
acgcgctcgatcaaggatctgtttcctcgctatcaaacgatgcgaggaaaactgtgtgag
cgtaaagcaggctgggacacccatggacttcctgtcgaagtggaagtctgcaaagagatg
gggatccactcgaaggaagagatcgaagcctttggcatcgagccctttattcatcgctgc
caagcgagcgtttggcgctacatgcagcagtgggaaaaactgaccgaacgcctcggcttt
tggatcaaactcgaccaggcctacgtcacctatcaccagtcgttcgtcgaatcggtctgg
tggtcgctcaagcaactgttcgataacggtcttctgtaccaaggccacaagatcgtttgg
tggtgggcccaaggcgggaccgcgctatcgagcggcgaagtagggcaggggtatcgcgaa
gtcgccgacccgagcgtttacgtcctgtttccgctgctcgacgatgccggaaatcccgaa
ggaacgtcgctcctggtttggaccaccacaccttggacactcccaagcaaccagttcgct
gcagtccatcccgatttggattacgttgtcgcgcgtgataccgaaaccgatcagcggatc
atccttgcagcagcactggttgagacgatcgctgcgaagtccaagcgtccactggaagtc
gtcaaaacgctcaaggggagcgaactccttggccggcgctatgtgccaccttattcgtat
tactacagccaactcggcagcacgactggcaagctcgttgcaggtggcgaagcctccatt
gcatggcgtgtggtagctgccgatttcgtgacgaccgacagcggtagtggcgtcgtgcat
caagcacctgcctttggcgaagtcgacttcgacgtgcttgtagctgaaaaagcgaagttc
gtcgtcggcgaaggtcctgaactgatctgcgccgtcggtccggatggcaagttcaccgca
gaagcgccgacctaccaaggtcgctgggtgaaggattgcgacaaagaaattcagcgtgaa
ctcaaggctgctggcttgctttatcaccaagagcaatacctgcacgactatcccttctgc
tggcgcgccgacaacgatccgctgatccagtacccacgtcgaagctggttcattcggacc
accaagttccgcgacgaaatgctcgcgagcaacgagaaaatcaactggcttccggggcat
atcaaagaaggtcgcttcggcaacttcctcgagagcaatgtcgactgggccctttcgcgc
gaacgcttctggggcactccgctgccgatctgggtctgcgagaccacaggccagatgcag
gcgattgccagctatgccgagctcgagcaaaagcctggcgcgagcggcttcgaagcgtgg
gctaatgccaagcaagccaatcccgaacttgtcgaagatctgaaggtgcacaagccttac
atcgacaacatcacctacgactcgccgtttgccactggcgcgaagatgcgccgcgtgagc
gaagtgatcgactgttggtacgacagtggcgcgatgccattcgcgcagtggggctatccg
cacaagggagccgctgattttcagcagcagtttcccgctgacttcatcagcgaagcaatc
gatcaaacccgaggctggttctatagccaactggcgatcagcacgatgctgtttggcaaa
ggtggcgtgagcggcgaagcacagcctcgcgagtatccgcatccatttaagaactgcatc
gtgcttggactgatgctcggcgaagatggccagaagatgtccaagagcaagcgaaactat
cgcgagcccaacgagatctttgataagtacggcgctgatgcactacgctggtatttcttt
gcgaatcaggctccctggacgagcattcgctacaaagaacagtcgatcaaagacagcatc
cctgagtttctgttgcgactctggaactgctattcgttcttcgtgatctacgccaacatc
gacggcttcgatccctcgaaattgctcgccgatgtcggtgatggacaactcgatgcagcc
acgcttgccaaagccaagcactatcgccccatcgccgaacgcggtgagctcgatcgctgg
atcatgggcgagttgcacaagacttccgccgacgtcaccaggctgatggatcagtacgac
aacttcgaagcttgcaagcttttgaacgcctttgtcgacggactatccaactggttcgta
cgtcgttcgcgcgaacgtttttgggctgccgataaaacctcgcccgaaaagctcgacgcc
tactggaccctctatgagtgcctgctcaccaccgcgaaactcatcgcgccgttcacgccg
ttcctcgcggaaacgctgtggcagaacctcgcgcggtcagttagcagcgacgtcctgaaa
agcgtgcatttgtgcgattttcctgagggaaatgcagcgaatgtcgactcgctgctgtca
gaacgaatgaagctcttgcgcgaaatcgcgtcgctcggtctttcggctcgcatggcgaac
aaactgaaggttcgtcagcctttgtcgcgagtggaagtgattctgagcaacgcgacacat
caagcgtggctcaccgagcacgacgaacttttgcgcgacgaactgaacgtcaaaacaatt
gactacgccaccaaggctgacgagtacatcacctaccaagtgcagcctaacttcaagcga
ctcggtcccaagatcggcaaactgctccccgcctgcaaagcagcgctcggtaatgccgac
ggggcgacgctcctagcgcagttgcaagccaccggcaaagtggtactcactcttggcggc
gagacactcgaactcgacaacgaagatatccaggtccgcttacaagccaaagaaggctgg
gctgcggctcaaggctcgggctgcgtggtcgtcctttcgaccgaacttacccccgcgctg
attcgcgaaggttatgcccgagacctcgtgcggctgattcaagatcgtcgtaaagaactc
gggctagactacagcgatcgaattgaagtgggagtcgtttcgaactcggaagaactagct
tcagcggttctcgagcacgcatcgttcatcgccagcgaaacgcttgccacgcatgtcgga
acttccgctctcgattgtgaagcggtcgaaactgaactcggcgagattccgatttcgctt
tacgttcgaaaagtctag
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