Pseudopedobacter saltans: Pedsa_0922
Help
Entry
Pedsa_0922 CDS
T01430
Name
(GenBank) Smr protein/MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
psn
Pseudopedobacter saltans
Pathway
psn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pedsa_0922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psn03400
]
Pedsa_0922
DNA repair and recombination proteins [BR:
psn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Pedsa_0922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Motif
Other DBs
NCBI-ProteinID:
ADY51494
UniProt:
F0SAB7
LinkDB
All DBs
Position
1118403..1120769
Genome browser
AA seq
788 aa
AA seq
DB search
MIYPQNSLEKLGFDEIKRGIKSYCISEMGIDMVDKIRFITNYDQIIKFLRQTNEFKTIIQ
TDEALPIQSFYDIKKLSDKAKIEGTFLSEEEFFQVYNSLQTAFAVIKYFEDREGIYPNLE
ALFEHLPIEKSILREIERIIDAKGKIKNNASRLLGDIIDAIAKAEQDARKKIDQIYKNAQ
ANNWVADGSLTVRDGRLCIPILAENKRKLKGFIHDESATGQTVYIEPEEVFNLNNLVRDL
EFEKRREIIRILTELTDKLRPFVPILYSYHGFLTKLDFVRAKALFAIEIDAKMPVLLNEP
KLKLVNAKHPLLVMSGKEAKKTVVPLNMHLDTSTRILLVSGPNAGGKSVAMKTVGLLQIM
VQAGLLVPADEESEFSVLKQIFADIGDDQSIESDLSTYSAHLSKMKYFTENANGKTLVLI
DEFGTGTDPQFGGPIAEAVLELINKKKALGVITTHYSNLKIFANHTEGLENGSMIFDNVN
LKPLYILEMGKPGSSYAFEIAQKIGLSKQLIDLAKSKINIEQQKVDSLLLDLEREKKEIY
DKKKYIEREKKNVETLVRENNQLKDYFEENKRNIIKQAKLEAQQIIKDANKLVENTISDI
KSAKADKETTKKLRENLHVELKRHEIKPAGNKSVKPEQKEIVAGDWVKLIETGNIAKVIE
VSKDNLIIAFGELRSVVKKNKVEKVGQSEVPKEVKKANSVSHTQSAVDFVSEIDVRGMRG
EDALHKIEQLLDRAIMFSMGSFKVIHGKGDGILRKLIRNYLKKYSEVDRLEDEHVDRGGD
GITYVYLK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgatttatccacaaaatagtttagagaagcttggttttgatgaaataaaacgaggaatc
aagtcttattgtattagtgagatgggaatagacatggtggataaaatcaggtttattacc
aactacgatcagattataaagttcttacgtcaaacaaacgagtttaaaacaataatacag
acggatgaagctttacctattcaaagcttttatgatataaagaagctttctgataaagcg
aaaatagaaggtacatttctttctgaagaggaattttttcaggtttataattcattacaa
acagcatttgctgtaattaaatactttgaagacagggaagggatttatccgaatctagaa
gccctttttgagcatcttcctatagaaaaaagtatacttcgtgaaatagagaggattatt
gatgcaaaagggaagattaaaaataatgcatcccgattactgggcgatattatcgatgct
atagcaaaggcagagcaggacgcaaggaagaaaatagaccaaatttataagaatgcacaa
gcaaataattgggttgccgacggtagtttaacggtacgagatggaaggttatgtatccca
attctggcagaaaataaaagaaagttgaaaggctttattcatgacgagtcggcaacaggt
caaactgtttatattgaaccggaagaggtctttaacttaaataatttagtaagggattta
gagttcgagaaaaggcgagaaatcatcaggattctgaccgaactaacagataaattgcga
ccttttgtgccgatcctttattcttatcatggatttctaaccaaattagatttcgtacgg
gcaaaagcgttgtttgctatagaaatagatgcaaaaatgccggttctcttgaacgagcct
aaattgaaattagtaaacgctaaacatccgctattggtgatgtcgggtaaggaagcgaaa
aaaacagtagttccgttaaatatgcatctggacaccagtaccagaattcttttagtttcc
ggaccaaatgctggaggaaagtctgtagccatgaaaaccgtaggcttattgcagattatg
gttcaggctggcttgttagttcctgcggacgaggagtctgagtttagcgttttaaagcaa
atatttgcagatattggagatgatcagtcgatagaaagtgacttaagtacatatagcgct
catctttcgaaaatgaagtattttaccgaaaatgctaacggaaaaacattggttttaata
gatgaatttggtacaggtactgatccgcagtttggtggcccgatagctgaagccgtttta
gagcttatcaataagaaaaaagcattgggcgtaatcaccacgcactattccaatctgaaa
atatttgccaaccatactgaaggtttggaaaacggatcgatgatatttgataacgttaat
ttaaaaccgctctatattttagagatgggaaagccagggagttcttatgcatttgaaatt
gcccagaaaattggattatccaagcaattaatagatcttgctaaaagtaaaataaacatc
gagcaacaaaaagtagattccttattactggatttagagcgtgagaaaaaagaaatctac
gataagaaaaaatatattgaaagagaaaagaaaaatgtagagacacttgtaagagaaaat
aatcaactcaaggattattttgaagagaataagcgtaatattattaaacaggccaaatta
gaagcacagcaaattataaaagatgccaataaattagttgagaatacaatttccgatatt
aagtcagcaaaggcggataaagagacaactaaaaagcttcgggagaatcttcatgtcgaa
ttgaaaagacatgagattaaacctgcagggaataaatcagtcaaaccagagcaaaaggaa
attgtagcgggagattgggtcaaattgattgaaaccggaaacattgcaaaagtaattgag
gtaagtaaagacaatcttataatagcatttggtgaattaagatctgttgtaaagaaaaat
aaggttgaaaaagtaggacaaagcgaggttcctaaagaagttaaaaaagcaaattccgta
agtcacacacaatcggcagttgattttgtaagtgaaatagacgttcgagggatgcgtgga
gaagatgctttacataaaatagagcaactgttagatagggcgataatgttttccatggga
tcttttaaggtcatacatggtaaaggagatggaatcttaaggaaattgataaggaattat
ttgaagaaatattctgaagtagatagacttgaagatgaacatgtggatagaggaggtgat
ggaatcacatatgtttatttgaaataa
DBGET
integrated database retrieval system
