Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_0694
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Entry
PSPPH_0694 CDS
T00266
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSPPH_0694 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_0694 (recC)
Enzymes [BR:
psp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSPPH_0694 (recC)
DNA repair and recombination proteins [BR:
psp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSPPH_0694 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AAZ34803
UniProt:
Q48NN2
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All DBs
Position
809448..812924
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AA seq
1158 aa
AA seq
DB search
MSVTTSLSAGFMVVQGNRPDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DAQDEDSGGCGIAAAIDVQLPGSFMWTLYRMVLGSDEIPSTSLLDKTPLTWRLMRLLPEL
INQPHFEPLQRFLTDDTDLRKRYQLSERLSDLFDQYQVYRADWLEDWAAGRHQLRDGRGQ
ARPLSAANCWQAELWRALLDDVGAEGMSQSRAGVHQRFIERIGNMTEAPPGLPARVIVFG
ISSLPAQALEALAGLAKFSQVLLCVHNPCRHHWTDIVADKDLLRHQYKRQVRKTGMPMVL
DPQALHQHAHPLLAAWGKQGRDYINLLDSHDDPRSYRSSFKDERIDLFSEVEPTNLLNQL
QDDILELRPLDETRELWPAVDPLEDRSVRFHVAHSAQREVEVLHDQLLARFSKDPGLRPR
DVIVMVPDIDSYAPHIRAVFGQIEREDRRFIPFTLADQGQRGREPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFRIQERDLPTLHRWIEGAGIRWGLNAQQRAGLGLPDALEQNS
WHFGLRRMLLGYAVGAGDAYDGIEPYDEIGGLDAALIGPLVALIDALQVAHTELSTPATP
YAWGTRLQSLLQLFFLADSEHDDYLLAQLETLRENWLETCEAVRLTDELPLTVVREAWLA
GLDQGRLSQRFLAGSVNFCTLMPMRAIPFKVVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGHSIRDNSERPASVLIGQLRDHLARGWKLTG
ETEPDGKQDDGERLLNALTVDHPLQPFSASYFHAGTGYFSFAREWRLLHETDLQVPVPQA
LPPHEQEEPLSIAQLQDFLRNPVKHFFSQRLKIYFEVAEAPLADEEPFVLDALERYGLSE
SLLSAAMASPDDMDVALKAQALKLQASGLLPLAGFGTLMQSELIEPLPDVLKRYHDLLTL
WPETLSSALPISFSHGSVSIDGWLGGLHRNARGELLLVTAIPNSIGSKKTRKWHRLIRPW
VNHLVACACELPLHTALVASDETLMLEPLDKDAAITTLNHLLMAWLRGMQEPLPVAVKTA
FAWLGQPADKAEAAARKAYEGDGQTTDGERRESTALARQFPDFDALVDSEEFAGWCETLY
KPVYDAPWQSLSGGEGGA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttacaacctctctgagtgcaggtttcatggtggttcaaggcaaccgcccggat
gagctgcgcagcctggttgtgtcgtggatgcgacgttatccattggcccccctggaaaac
gagattgcgctggtccagagcaacggcattgcgcagtggttgaaactggcgttggccgag
gacgctcaggatgaagatagcggtggctgtggcattgccgcagccatagacgtccaattg
cccggtagcttcatgtggacgctgtaccgcatggttctcggaagcgatgaaataccgtcg
acttccttgctcgacaagaccccgctgacctggcgcttgatgcgcttgctccctgaactc
atcaatcagccacacttcgagcccctgcagcgtttcctgaccgacgacactgatctacgc
aagcgctatcaattgtccgagcgcctgtcagatctgttcgaccaatatcaggtttaccgc
gccgactggctggaggactgggccgctggccgccatcaattgcgcgacggccgaggtcag
gccagaccgctgtcagccgccaattgctggcaagccgaactgtggcgcgcgctgctggat
gatgtcggtgccgaaggtatgtcgcagagtcgagcgggtgtgcatcagcgcttcatcgag
cgcatcggcaacatgaccgaagcgcccccgggtttgccggcacgcgtcatcgtttttggc
atttcctcgttgcccgcacaagcgctcgaggcattggcgggtctggcgaagttcagccag
gttctgctctgcgttcacaacccgtgccgccatcactggactgatatcgttgccgacaaa
gacctgctgcgtcaccagtacaaacgccaagtgcgcaagaccggaatgccgatggtcctc
gacccgcaagcgctgcatcagcatgctcatccgctgctcgctgcctggggcaagcagggg
cgcgattacatcaatttgctggacagccatgatgatccgcgcagctaccgctcttcgttc
aaggacgagcggattgatctgttcagtgaagtcgagcccaccaatctgctgaaccagttg
caggacgatattctcgagctgcgcccgctggatgaaacccgtgagctctggccggcagtc
gatccgctggaagatcgctcggtccgtttccatgttgcgcacagtgcgcagcgcgaagtg
gaagtgctgcatgaccagctattggcacggttcagcaaagacccgggcctgcgcccgcgt
gacgtgattgtcatggtcccggatatcgacagctacgccccacacatacgagcagtattc
gggcaaatcgaacgcgaagatcgtcgcttcattccctttacgctggccgaccaggggcaa
cgtggccgcgaacccttgctgattgccgttgaacacctcctcaaactcccggacagccgc
ttcccggtcagcgaaatccttgacctgctcgacgttcccgccttgcgcgcgcgcttcagg
attcaggagcgcgatctgccaacgctgcaccgctggatagaaggcgccggcattcgctgg
ggcctcaacgcacagcagcgtgccggtctggggttgccggatgcgctggagcagaacagc
tggcattttggtctgcggcgcatgctgctgggttacgccgtgggtgcaggtgacgcttac
gacggcattgagccttacgatgagattggcgggcttgatgccgcattgatcggcccactg
gtagcgctgattgacgcgcttcaggtggcccatacggaattatcgacacccgcaactccg
tacgcgtggggaacgcgcctgcaatcgctgttgcagttgttcttcctcgccgacagcgaa
cacgacgattacctgctcgctcagcttgaaacactgcgcgaaaactggctggaaacctgt
gaagctgtaaggctgaccgatgagctgccgttgaccgttgtgcgtgaggcctggctggcc
gggcttgatcaggggcgtctatcccaacgctttctggcgggctcggtcaacttctgcacc
ctgatgcccatgcgcgccattccattcaaagtggtctgcctgctgggcatgaacgacggc
gattacccgcgcgcgcaaccgccgctggatttcgacctgatgggcagcgactaccgtccc
ggcgaccgttcgcggcgtgaagacgatcgctacctgttgctggaggcgctgctctcggcc
agagaccagctctatatcagctgggttggccacagcattcgggacaacagcgagcgtcct
gcatcggtgttgattggccaattgcgcgatcacctggcccgtggctggaaactgactggc
gagaccgaaccggacggcaagcaggatgatggcgagcgtttgctgaacgcgctgactgtg
gatcacccgctgcagcctttcagtgccagttacttccatgcaggcacggggtatttcagc
ttcgcccgcgagtggcgcctgctgcatgaaaccgaccttcaggtgcccgtacctcaagcg
cttcccccccatgagcaggaagaacccctgtccattgcacagttacaggacttcctgaga
aacccggtgaagcatttcttcagccagcgcctgaagatctatttcgaagtcgccgaagcg
ccgctcgccgatgaggaaccgttcgtgctggacgcgcttgagcgttacggcctcagtgaa
agcctgctcagcgcagcgatggcttcccctgacgatatggatgtcgccctgaaagcccag
gcactgaaactgcaagccagtggcctgctgccgctcgcggggttcggcaccttgatgcag
agcgagctgatcgagccgttgccagacgtcctcaagcgttaccacgacctgttgaccctc
tggcccgaaacgttgagcagcgcattaccgatcagtttcagccatggcagtgtgagtatc
gatggctggcttggcgggctgcaccgtaacgctcgtggtgagctgttgctggtcacggcg
attcccaacagcatcggctcgaaaaagactcgcaaatggcaccggctgattcggccgtgg
gtcaatcacctggttgcctgcgcctgcgagctgccgttgcacacggcactggtggccagt
gacgaaaccctcatgctcgaaccgttggacaaggacgcggccattaccacgctgaatcat
ttgcttatggcttggctacgcggcatgcaagagcctttaccagtcgccgtcaaaaccgca
tttgcctggctgggccagcccgccgacaaagccgaagcagcagcccgcaaggcctacgag
ggtgacgggcagaccactgatggtgagcgccgcgaaagcaccgcgctggcccgacagttt
ccggactttgacgcgctggtcgacagtgaagagtttgcaggctggtgcgagacgctctac
aaaccggtttacgatgcgccctggcagtcgttgtctggcggggagggtggcgcatga
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