Stutzerimonas stutzeri DSM 4166: PSTAA_0771
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Entry
PSTAA_0771 CDS
T01976
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
psr
Stutzerimonas stutzeri DSM 4166
Brite
KEGG Orthology (KO) [BR:
psr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psr03016
]
PSTAA_0771 (ligT)
Enzymes [BR:
psr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PSTAA_0771 (ligT)
Transfer RNA biogenesis [BR:
psr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PSTAA_0771 (ligT)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AEA82681
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All DBs
Position
complement(840086..840607)
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AA seq
173 aa
AA seq
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MSEESLRLFFALPCPPEQATAICAWRDGQAFDGRPVAEANLHMTLAFLGAQPKERLDALL
TMASGIEGTAFDLRLDRLTTIGKGFICLQPSTTPQALSRLVATLAEHLAALGVVLDSRPF
LPHLTLARQARSRPSGAAPGFAWHADHFGLYLSTATPGGVRYDSLGRWPLAAP
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaaagtctgcgcctgttcttcgccctgccctgcccgcccgagcaggcgacg
gccatctgcgcctggcgtgacggccaggcattcgacgggcgcccggtggccgaggccaat
ctgcacatgaccctggcctttctcggtgcccagccgaaggagcggctggatgcgctgctg
accatggcatcaggcatcgaggggacggcattcgacctccggctggaccggctcaccacc
atcggcaagggcttcatctgcctgcaaccgagcacgacgccgcaggccctgtcgaggctg
gtcgctacccttgccgagcatctggccgcgctaggcgtggtgctcgacagccggcccttc
ctcccgcacctgacgctggcccgccaggcccgcagccgaccgagcggcgccgcgccgggc
ttcgcctggcacgccgaccacttcggcctctatctgtcgacggcaacgccgggcggcgtg
cgctacgactcgctgggacgctggccactggcagcgccatag
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