KEGG   Paenibacillus stellifer: PSTEL_06015Help
Entry
PSTEL_06015       CDS       T03335                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pste  Paenibacillus stellifer
Brite
KEGG Orthology (KO) [BR:pste00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    PSTEL_06015
Enzymes [BR:pste01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PSTEL_06015
DNA repair and recombination proteins [BR:pste03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PSTEL_06015
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AIQ62724
UniProt: A0A089N1Z6
LinkDB All DBs
Position
complement(1256744..1257700)
Genome map
AA seq 318 aa AA seqDB search
MKLQPIVPFEPVLSDQLPEGEQWIAQIKWDGVRMLSYFDGATTELINRKGNYRTAQYPEL
ADAAAYCRAKSCILDGEVIALKEGKPSFHEVMRRDSLRSGSSIRQMVPRLPVLYMVFDLL
YCNGEWIMDKPLFERQRLLQDILLPHPNVQLVPSYHDADQLFRSAQANELEGIVCKDVRG
TYMPGGKDRRWIKRKIIQDVNAVAGGFTFRDGTVNAILLGLYDSGNGLRYIGHAGTGRLT
VKDWRELTELAPSLAASSMPFASLPQRAKGAFWIRPELVFKIHFLEWNASGTLRQPSIQA
RVDIAPAECVLPEAFVNN
NT seq 957 nt NT seq  +upstreamnt  +downstreamnt
atgaaacttcagcctattgtaccgttcgagcccgtgctctccgatcagctccctgagggc
gagcaatggatcgcccagatcaaatgggacggcgtccggatgctgtcctatttcgacgga
gccaccaccgagctgattaaccgcaaaggcaactaccgtaccgcccagtatcccgagctt
gccgatgccgccgcctactgccgggcgaaatcctgcattctggacggcgaggtgattgcg
ctcaaggaaggcaagccttcctttcatgaggtgatgcggcgggatagcctgcggagcgga
tcgtccatccggcagatggttccccgtctgccggtgctctatatggtgttcgatctgctg
tactgcaatggagaatggatcatggataagcctctctttgagcgccagcggcttctgcag
gacattctgctgcctcatccgaatgtgcaactcgtccccagctaccatgatgccgatcag
ctgtttcgctccgcacaagccaatgagctggagggcattgtgtgcaaggatgtgcgcgga
acctatatgcccggcggcaaagaccggcgctggatcaagcgcaaaatcatccaggatgtg
aatgccgtcgcaggcggcttcacgttccgcgacggaacggtcaatgcgatcctgctcggg
ctgtacgacagcgggaatggactccgctatatcggtcatgcgggcacaggcagattgacc
gtcaaggactggcgggagctgacggaattggctccgagtctggccgcatcttccatgccg
ttcgcttctctcccccagcgggccaagggagcgttctggatcaggccggagcttgtgttc
aagattcattttctcgaatggaacgcctccggaacgctgcggcagccgagcattcaggcc
agagtcgatatcgcgcctgccgagtgcgtgctgccggaggcttttgtcaataattaa

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