Pedobacter steynii: BFS30_01275
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Entry
BFS30_01275 CDS
T04469
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psty
Pedobacter steynii
Pathway
psty00040
Pentose and glucuronate interconversions
psty01100
Metabolic pathways
psty02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BFS30_01275
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BFS30_01275
Enzymes [BR:
psty01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BFS30_01275
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AOM80568
UniProt:
A0A1D7QPI2
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Position
complement(291506..292858)
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AA seq
450 aa
AA seq
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MSLLLLLVVLTFSKCKKGSDVATLENSSDLTEVASLSTSSITGIKTIDATKAFSDAGFSY
KVINIPGASDSERTPKASTLRLFENGKELGPAHAMHADIRNLGKGRFSHWAGSLYFSASD
NTNPRTNGRTYTYSLDGSTASAISPPVTPPVTEQPVAGSAPVGFASVDGKTTGGIGGQTI
TVSSLSALKTAVESNAASIILVSGKITGTGFLNVKSNKTIQGLPGSSLEGVGLMMYGSSN
VIIRNMTIRNVVTYSNIIIKEGAHHIWVDHCDLSSDRNHGWDYYDGLLDVGKRADYVTLS
WNRLHDSHIPMLIGFGDENTDDIGHLRVTVNNNYFYNVSERQPSTRFGYIHVFNNYLQNG
SGYGIGVTMGATVRTDNNYFENQAVPIYTDYNAKPGYVSGAATNVYANSKANRISTAAST
WVPAYEYKSVLIAAANVPAVVSAGAGATLR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagccttctgctactgctggttgtattaacttttagtaaatgtaaaaaaggctcggat
gtggcaaccttagaaaactcatctgatttaaccgaagtcgcaagcctgagcacgagtagc
atcaccggaataaaaacgattgatgcaacgaaggcctttagcgatgctgggttttcttac
aaagtgattaacatccccggggcaagtgattcggaaagaacacccaaagcttccacgctc
aggctatttgaaaatggtaaagaactaggccctgcgcatgcgatgcatgctgacatcagg
aatctggggaaaggccgttttagtcattgggctggcagcctgtatttttcggcttcggat
aataccaatcccaggactaatggaaggacctatacctatagtcttgatggcagtacagct
tctgctattagccctcccgtaaccccgcctgttactgaacagcctgttgccggttctgca
ccggttggattcgcctcggtggatggaaaaacaacaggtggtattggaggtcagacgatt
acggtatccagcttatctgcgttaaaaactgcggtagaatcgaatgcggcttcaatcatt
ctggtatccggaaaaattacgggtacgggatttctgaatgtgaaatcgaataagaccatt
caggggctgccgggttcaagtctggaaggtgtaggcctgatgatgtatggcagcagcaat
gtcattatcaggaacatgaccatcaggaatgtggtgacgtattctaacatcatcattaaa
gaaggggcgcatcacatctgggttgaccattgtgatttgtcgtccgacagaaatcatgga
tgggattattacgatggtttattggatgtaggtaagagagcggattatgtcacgctttcc
tggaacaggttacacgatagccatattccaatgctgatcggttttggggatgagaatacc
gatgatatcgggcatcttcgcgttaccgtaaacaataattatttttataatgtttctgaa
cgtcagccgagtaccagatttggttatatccacgtatttaataattacctgcaaaatggc
agtggttatgggattggggtgactatgggggctaccgtaaggactgataacaattatttt
gaaaaccaggccgttccaatttatacggattacaatgccaaacctggttatgtgagcggt
gcagcaacaaatgtttatgccaacagcaaggccaacaggatttctactgcagcatcaaca
tgggtgcctgcttatgagtataaatctgtattgatcgctgcggcaaatgttcctgcagtg
gtaagcgccggggcaggtgcaacattgaggtaa
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