Pseudomonas sp. VLB120: PVLB_09960
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Entry
PVLB_09960 CDS
T02897
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv00500
Starch and sucrose metabolism
psv01100
Metabolic pathways
psv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PVLB_09960
Enzymes [BR:
psv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PVLB_09960
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Rhabdo_NV
Motif
Other DBs
NCBI-ProteinID:
AGZ34788
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Position
complement(2187953..2190106)
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AA seq
717 aa
AA seq
DB search
MSPRTPKKTRSVAPSRIREGLPFPLGATWDGLGVNFALFSANASKVELCLFDSSGEEELE
RIELPEYTDEIYHGYLPDAHPGLVYGYRVHGPYEPENGHRFNPNKLLIDPYAKQLVGGLK
WSEALFGYTIGHPDGDLSFDERDSAPFVPKCKVIDPAFTWGRDQRVLVPWERTIIYEAHT
KGISMRHPAVPEALRGTFAGLANDELLKHIKDLGVSSIELLPIHAFVNDQHLLQKGLNNY
WGYNSIAFFAPHPSYLASGKIAEFKEMVAHLHDAGLEVILDVVYNHTAEGNELGPTLSMR
GIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQLVTDSLRYWAGEMRVDGFRFDLA
TILGRYHDGYNERHSFLVACRQDPLLSQVKLIAEPWDCGPGGYQVGHFAPGWAEWNDRFR
DTVRAFWKGDEGQLADFASRMTASGDMFNNRGRRPYASVNFVTAHDGFTLRDLVSYNHKH
NEDNDENNQDGTDNNLSWNCGAEGPTDDPTINALRTRQMRNFFATLLLAQGTPMIVAGDE
FSRTQHGNNNAYCQDSEIGWVNWELDEEGEELLAFVKRLTRLRLAYPVLRRSRFLVGDYN
EAIGVKDVTWLAPDGSEMSVEQWEDPHGRCLGMLMDGRAQVSGIARPGSEATLLLIVNAY
HDTVPFLLPAVPEGDYWSCLINTDRPEMRKPQHLQFDTTFEVKGRSVLLMVLQREDE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgcaccccaaagaaaacccgctctgtcgccccatcgcggatccgcgaagga
ctgcccttcccccttggtgccacctgggatgggctgggggtcaacttcgcattgttctcg
gccaacgccagcaaggtcgaactgtgcctgttcgactccagcggcgaagaggaactggag
cgcatcgagctacccgagtacaccgacgagatctaccacggctacctgcccgacgcgcat
ccggggctggtctacggctaccgcgtgcatggcccttacgagccagagaacggccaccgc
ttcaaccccaacaaactgctgatcgacccctatgccaagcaattggtcggcggcctgaaa
tggtccgaagccttgttcggctacaccattggccaccccgacggcgacctgtcgttcgat
gaacgcgacagcgcgcccttcgtgcccaagtgcaaggtgatcgaccctgccttcacctgg
ggccgcgatcagcgcgtgctggtgccctgggagcgcacgatcatctacgaagcccacacc
aagggcatcagcatgcgtcacccggcggtgccggaagctctgcgcggcactttcgccggc
cttgccaatgacgagttgctcaagcacatcaaggacctgggtgtatcaagcatcgagctg
ctgccgatccatgccttcgtcaacgaccagcacctgctgcaaaaaggcctgaacaactac
tggggctacaacagcatcgccttcttcgcgccgcatcccagctacctggccagcggcaag
atcgccgagttcaaggagatggtcgcccacctgcatgatgccggcctggaggtgatactc
gatgtggtctacaaccacactgccgagggcaacgaactcggtccgacgctgtccatgcgc
ggcatcgacaacgcctcgtactaccgcttgatgccggatgacaagcgctactacatcaac
gattccggcacaggcaacaccctcgacctgagccacccctgcgtactgcaactggtgacc
gactcgctgcgctactgggccggcgagatgcgcgtcgatggtttccgcttcgacctggcg
accattctcgggcgctaccacgacggctacaacgaacgtcacagcttcctcgtcgcctgc
cgccaggacccgctgctcagccaggtcaagctcatcgccgagccatgggactgcggcccc
ggcggctaccaggtgggtcacttcgcaccgggctgggcggaatggaacgaccgcttccgc
gataccgtgcgtgcgttctggaagggtgacgaaggccagctagccgatttcgcctcgcgc
atgaccgcctcgggcgacatgttcaacaaccgtggccgacgcccctatgcctcagtcaac
ttcgtcaccgcccatgatggcttcaccctgcgcgacctggtgtcgtacaaccacaagcac
aacgaagacaacgacgagaacaaccaggacgggaccgacaacaacctgtcatggaactgc
ggggccgaaggcccgaccgacgacccgaccatcaatgccctgcgcacccggcagatgcgc
aacttcttcgcgaccttgctgctggcccagggcaccccgatgatcgtcgccggcgatgag
ttcagccggacccaacatggcaacaacaacgcctattgccaggacagcgagatcggctgg
gtgaactgggagttggacgaagaaggcgaagagctgctggccttcgtcaaacgcctgacc
cgtctgcgcctggcctacccggtgctgcgccgctcacgtttcctggtcggagactacaac
gaagcgatcggggtcaaggacgtcacctggctggcaccggatggcagcgaaatgagcgta
gaacaatgggaagacccccatggccgctgcctggggatgctaatggacggtcgcgcccag
gtgagcggcatcgcccgccccggttcggaggctaccctcctgctgatcgtcaatgcctac
cacgacaccgtaccgttcctgctaccggccgtacccgagggcgattactggagctgcctg
atcaacaccgacaggcccgagatgcgcaaaccccagcatctgcagttcgatacgaccttc
gaagtcaaaggccgctcggtgctgctgatggtgctccaacgagaagatgaatag
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