Pseudomonas sp. VLB120: PVLB_26077
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Entry
PVLB_26077 CDS
T02897
Name
(GenBank) outer membrane porin, OprD family protein
Organism
psv
Pseudomonas sp. VLB120
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Gene cluster
GFIT
Motif
Pfam:
OprD
Porin_4
Motif
Other DBs
NCBI-ProteinID:
AGZ37952
UniProt:
A0AA86DY08
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Position
pSTY:32057..33325
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AA seq
422 aa
AA seq
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MSKSKKIAFAGLLAANAASLQAAGFVEDSKAKVTLRNYYFDRNYINQTPQAAAREWAQGF
IVNFNSGFTEGVVGFGLDAQAMMGLRLDSSPDRVGTGLLPFSASTREPAKDYSELGLTAK
VKVSKTELQYGTVSTFLPIAFASPTRLLPQTFRGTYLRSQDIPDLSLHAGWLDRINLRDS
TDYQKMRVSAPNGRFNGAAESDAFYFLGGDYAWSKNLTLKYYYAELEDIYDKNYLGVVDN
RELGPGRLTSDFRFYDSKDNGSAKAGKVDNRNTALMLTYQLGVHRLGAGYMQLTGDTAMP
YLFGTEPLVITEGTLSSEFLNPKERSWQVKYDYDFVGVGIPGLKGMLRYVSGDNIDLPNL
GGNKLKESEKDVELSYVIQSGTFKDVAFRVRHAWYRNDFGPGATHRDDNELRVNIDYTFA
LW
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatcaaaaaaaattgcattcgcagggctgctggctgcaaatgcagcttcgcta
caagcggccggcttcgtggaagattcgaaagccaaggtaacactgcgcaactactacttc
gatcgcaactacatcaaccagacaccgcaagctgcagcgcgagagtgggctcagggtttc
atcgtgaacttcaattcggggttcaccgagggtgtagtcggctttggactggatgctcaa
gccatgatggggttgcgcctcgactcctcaccagatcgtgtcggcaccggcctattgccg
ttctctgcctccaccagggagccagcgaaggactactccgagctagggctgacagcgaag
gtcaaggtttccaaaactgagcttcagtacggaaccgtgagcacgttcttgccaatcgcg
ttcgcaagtccgacacggctgctgccacaaaccttccgcggcacctacctgcgctcacaa
gacatcccagatctttctctgcacgcgggttggctggaccgaatcaacctacgggactct
actgactatcaaaagatgcgagtttcagcgccaaacggacgcttcaacggagcagcggag
tctgatgccttttacttccttggcggcgattacgcctggtcgaagaaccttacgctcaag
tactactacgcagagctcgaagacatctacgacaagaactatctcggtgtcgtggacaac
cgtgagctgggtccagggcggctcacctccgacttccgcttttatgattccaaagacaac
ggatccgcaaaagctgggaaggtagacaaccgcaataccgccttaatgctgacctaccag
ctcggcgtgcatcgtctcggcgctggctacatgcagctgactggggacactgcaatgccc
tatctctttggtaccgaaccactagtgattacggaaggcaccttgagctcggagttccta
aaccctaaggagagaagctggcaggtcaagtacgactacgactttgtaggcgttggcatc
cccggcctaaaggggatgctgcgctacgtcagcggagacaacattgaccttccgaacctc
ggcggcaacaaacttaaagaatcggaaaaagacgtcgagctttcatatgtaatccaaagc
ggcacgttcaaggacgtggcattccgggttagacacgcttggtatcgaaatgatttcggt
cctggagcgactcaccgtgacgacaatgagcttcgtgtgaacatcgattatacgtttgct
ttgtggtga
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